RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 NPFFO15130 113 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 CYB5AP00167 134 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 HCKP08631 526 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF728P0DKX0 622 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 SRMP19623 302 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 ADMP35318 185 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 GDNFP39905 211 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 GLIPR1P48060 266 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 BMXP51813 675 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 P2RX3P56373 397 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 GABARAPL2P60520 117 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 AESQ08117 197 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 C17orf58Q2M2W7 97 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 PIGYQ3MUY2 71 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 DDI2Q5TDH0 399 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 UBE2UQ5VVX9 321 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 RSBN1Q5VWQ0 802 aaPredicted RBP7.44□□□□□ -1.22
HMGN1-201ENST00000288344 LIPKQ5VXJ0 399 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 DYNAPQ8N1N2 210 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 BPIFB2Q8N4F0 458 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 TMEM86BQ8N661 226 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 TPRX1Q8N7U7 411 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 TMEM104Q8NE00 496 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 OR10K1Q8NGX5 313 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 RNF141Q8WVD5 230 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 CHST6Q9GZX3 395 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 NEK6Q9HC98 313 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 ONECUT1Q9UBC0 465 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 LINC00312Q9Y6C7 94 aa7.44□□□□□ -1.22
HMGN1-201ENST00000288344 DEGS1O15121 323 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 SLC22A1O15245 554 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 HOXA3O43365 443 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 IGLV1-47P01700 117 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 IGHV1-8P0DP01 117 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 HKR1P10072 659 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 CFPP27918 469 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 CD34P28906 385 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 RBM11P57052 281 aaKnown RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 RPS25P62851 125 aaKnown RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 FABP5Q01469 135 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 MED22Q15528 200 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 GRK1Q15835 563 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 TAF9Q16594 264 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 MIDNQ504T8 468 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 NCR3LG1Q68D85 454 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF626Q68DY1 528 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 C16orf87Q6PH81 154 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 BAIAP2L2Q6UXY1 529 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 CMTM4Q8IZR5 234 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 ASCC1Q8N9N2 400 aaKnown RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 BEND2Q8NDZ0 799 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 PLPPR1Q8TBJ4 325 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 MRPS24Q96EL2 167 aaKnown RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 Q96M66 194 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 JMJD8Q96S16 334 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 UQCC2Q9BRT2 126 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 EXOSC4Q9NPD3 245 aaKnown RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 TAS2R3Q9NYW6 316 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 ZNRD1Q9P1U0 126 aa7.43□□□□□ -1.22
HMGN1-201ENST00000288344 UBE2J1Q9Y385 318 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-201ENST00000288344 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 hADV38S2A0JD32 116 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 ODAMA1E959 279 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 MEX3AA1L020 520 aaKnown RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TRIM64CA6NLI5 447 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 FOXI3A8MTJ6 420 aaPredicted RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 VGLL3A8MV65 326 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TMEM14DPA8MWL7 114 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 LY6LH3BQJ8 138 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TRIM77I1YAP6 450 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 SIRPB1O00241 398 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 GEMIN2O14893 280 aaKnown RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 LDLRAD4O15165 306 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 MAGEB3O15480 346 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 ZNF780AO75290 641 aaPredicted RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 MAS1P04201 325 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 GALP22466 123 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 SAA4P35542 130 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 PPP3R1P63098 170 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 BAMBIQ13145 260 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 AANATQ16613 207 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 C21orf62-AS1Q17RA5 79 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 FIP1L1Q6UN15 594 aaKnown RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 HEPN1Q6WQI6 88 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 GDPD3Q7L5L3 318 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 CEACAM19Q7Z692 300 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 SATL1Q86VE3 508 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 PDZD9Q8IXQ8 264 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 FAM185AQ8N0U4 392 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 OSR2Q8N2R0 312 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 FAM89BQ8N5H3 189 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 THRSPQ92748 146 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TAF15Q92804 592 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TMEM203Q969S6 136 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 MUL1Q969V5 352 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 RCC1LQ96I51 464 aaKnown RBP7.42□□□□□ -1.22
HMGN1-201ENST00000288344 DUX5Q96PT3 197 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 TMED9Q9BVK6 235 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 CHIAQ9BZP6 476 aa7.42□□□□□ -1.22
HMGN1-201ENST00000288344 METTL9Q9H1A3 318 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms