RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 LPAR3Q9UBY5 353 aa16.21■□□□□ 0.19
PCDH1-201ENST00000287008 K7ESF4 209 aa16.21■□□□□ 0.18
PCDH1-201ENST00000287008 ACP1P24666 158 aa16.21■□□□□ 0.18
PCDH1-201ENST00000287008 UCP2P55851 309 aa16.21■□□□□ 0.18
PCDH1-201ENST00000287008 PSG4Q00888 419 aa16.21■□□□□ 0.18
PCDH1-201ENST00000287008 SURF2Q15527 256 aaPredicted RBP16.21■□□□□ 0.18
PCDH1-201ENST00000287008 MUC20Q8N307 709 aaPredicted RBP16.21■□□□□ 0.18
PCDH1-201ENST00000287008 NPTNQ9Y639 398 aa16.21■□□□□ 0.18
PCDH1-201ENST00000287008 NRXN2Q9P2S2 1712 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 S100A8P05109 93 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 GZMMP51124 257 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 PCOLCEQ15113 449 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 ZNF260Q3ZCT1 412 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 ADAMTS17Q8TE56 1095 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 CTSDP07339 412 aaPredicted RBP16.2■□□□□ 0.18
PCDH1-201ENST00000287008 HOXB1P14653 301 aaPredicted RBP16.2■□□□□ 0.18
PCDH1-201ENST00000287008 CCDC144NLQ6NUI1 221 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 OR10Z1Q8NGY1 313 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 R3HDM4Q96D70 268 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 TMEM231Q9H6L2 316 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 SMIM10L1P0DMW3 83 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 FAM3AP98173 230 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 OR5C1Q8NGR4 320 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 SMIM10Q96HG1 83 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 PCGF1Q9BSM1 259 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 OR51I2Q9H344 312 aa16.2■□□□□ 0.18
PCDH1-201ENST00000287008 CISD1Q9NZ45 108 aaKnown RBP16.2■□□□□ 0.18
PCDH1-201ENST00000287008 ABCA1O95477 2261 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 C9orf170A2RU37 121 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 DLL1O00548 723 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 TOX4O94842 621 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 OR2C1O95371 312 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 OR2C3Q8N628 320 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 PRSS27Q9BQR3 290 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 KCNK15Q9H427 330 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 PCDHGA9Q9Y5G4 932 aaKnown RBP16.19■□□□□ 0.18
PCDH1-201ENST00000287008 ABCA4P78363 2273 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 DOLPP1Q86YN1 238 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 CHRNA10Q9GZZ6 450 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 SLC45A2Q9UMX9 530 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 CST4P01036 141 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 MGAT2Q10469 447 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 FFAR4Q5NUL3 377 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 ZNF519Q8TB69 540 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 ADIPOR1Q96A54 375 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 LOC101059948A0A1B0GTJ6 334 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 RAB32Q13637 225 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 NCR3LG1Q68D85 454 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 C19orf48Q6RUI8 117 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 COA4Q9NYJ1 87 aa16.19■□□□□ 0.18
PCDH1-201ENST00000287008 RPS4XP62701 263 aaKnown RBP16.18■□□□□ 0.18
PCDH1-201ENST00000287008 ZNF680Q8NEM1 530 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 CXorf58Q96LI9 332 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 PIPOXQ9P0Z9 390 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 SLC25A10Q9UBX3 287 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-201ENST00000287008 TRAV8-7A0A075B6U6 113 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 PPYP01298 95 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 VDAC1P21796 283 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 GGTLC2Q14390 218 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 PLAC9Q5JTB6 97 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 CABLES2Q9BTV7 478 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
PCDH1-201ENST00000287008 ZNF320A2RRD8 509 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 PAX5Q02548 391 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 KLRB1Q12918 225 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 KIAA0141Q14154 515 aaPredicted RBP16.18■□□□□ 0.18
PCDH1-201ENST00000287008 PPP1R32Q7Z5V6 425 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 VWCEQ96DN2 955 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 RIPPLY2Q5TAB7 128 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 FLYWCH2Q96CP2 140 aaKnown RBP16.18■□□□□ 0.18
PCDH1-201ENST00000287008 HARBI1Q96MB7 349 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 WIPI2Q9Y4P8 454 aa16.18■□□□□ 0.18
PCDH1-201ENST00000287008 ANKRD20A5PA0PJZ0 165 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 GNG7O60262 68 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 TIAF1O95411 115 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 CTSBP07858 339 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 ADAT3Q96EY9 351 aaPredicted RBP16.17■□□□□ 0.18
PCDH1-201ENST00000287008 TRAV39A0A0B4J263 110 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 PJVKQ0ZLH3 352 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 SPINK9Q5DT21 86 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 MS4A7Q9GZW8 240 aaPredicted RBP16.17■□□□□ 0.18
PCDH1-201ENST00000287008 LIPGQ9Y5X9 500 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 IGHV3OR15-7A0A075B7D8 119 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 IGLV3-19P01714 112 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 PRDX2P32119 198 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 RHOBP62745 196 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 HLA-DRB3P79483 266 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 IL13RA2Q14627 380 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 MRGPRGQ86SM5 289 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 FDCSPQ8NFU4 85 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 SF3B6Q9Y3B4 125 aaKnown RBP16.17■□□□□ 0.18
PCDH1-201ENST00000287008 A0A0U1RQV5 110 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 FAM24AA6NFZ4 105 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 TTRP02766 147 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 VSIG8P0DPA2 414 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 PIGYQ3MUY2 71 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 NECAP1Q8NC96 275 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 GPR137Q96N19 417 aa16.17■□□□□ 0.18
PCDH1-201ENST00000287008 RNF122Q9H9V4 155 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms