RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 FAM172BPA6NC97 362 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 TRDCB7Z8K6 153 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 ATXN7O15265 892 aaPredicted RBP18.61■□□□□ 0.57
CCDC7-201ENST00000277657 VAMP1P23763 118 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 FCGR2CP31995 323 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 KIR2DS4P43632 304 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 KIR2DS1Q14954 304 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 IGSF11Q5DX21 431 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 ASB13Q8WXK3 278 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 MEGF10Q96KG7 1140 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 OR2V2Q96R30 315 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 PHB2Q99623 299 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 NGBQ9NPG2 151 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 SLC23A1Q9UHI7 598 aa18.61■□□□□ 0.57
CCDC7-201ENST00000277657 SIX6O95475 246 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 KNG1P01042 644 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 CTSDP07339 412 aaPredicted RBP18.6■□□□□ 0.57
CCDC7-201ENST00000277657 PGAM2P15259 253 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 HLA-GP17693 338 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 DNASE1P24855 282 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 SUPT4H1P63272 117 aaKnown RBP18.6■□□□□ 0.57
CCDC7-201ENST00000277657 ADORA2A-AS1P86434 159 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 LY6G6FQ5SQ64 297 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 DCAF12L2Q5VW00 463 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 LAMTOR1Q6IAA8 161 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 ZNF497Q6ZNH5 498 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 PRR7Q8TB68 274 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 FXYD6Q9H0Q3 95 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 OPN4Q9UHM6 478 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 GLS2Q9UI32 602 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 BOLA1Q9Y3E2 137 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 hCG_1807616A0A1W2PRN6 198 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 ZNF205O95201 554 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 RPS2P15880 293 aaKnown RBP18.6■□□□□ 0.57
CCDC7-201ENST00000277657 GLP1RP43220 463 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 SMIM21Q3B7S5 101 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 PLPPR1Q8TBJ4 325 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 LRRC29Q8WV35 223 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 WDR89Q96FK6 387 aaPredicted RBP18.6■□□□□ 0.57
CCDC7-201ENST00000277657 PLSCR3Q9NRY6 295 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 RASL12Q9NYN1 266 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 C14orf166Q9Y224 244 aaKnown RBP18.6■□□□□ 0.57
CCDC7-201ENST00000277657 PKD1L2Q7Z442 2459 aa18.6■□□□□ 0.57
CCDC7-201ENST00000277657 H7C1Q1 480 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 SPRY3O43610 288 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 SFT2D2O95562 160 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 SCTP09683 121 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 ZNF81P51508 661 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 HOXA4Q00056 320 aaPredicted RBP18.59■□□□□ 0.57
CCDC7-201ENST00000277657 HERPUD1Q15011 391 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 SPRNQ5BIV9 151 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 Q5BKY6 102 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 C11orf88Q6PI97 169 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 LILRB4Q8NHJ6 448 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 RNASE6Q93091 150 aaKnown RBP18.59■□□□□ 0.57
CCDC7-201ENST00000277657 MOB3AQ96BX8 217 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 COQ3Q9NZJ6 369 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 OR14J1Q9UGF5 321 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 MGAT4AQ9UM21 535 aa18.59■□□□□ 0.57
CCDC7-201ENST00000277657 DBX1A6NMT0 343 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 SRRM5B3KS81 715 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 CTXN2P0C2S0 81 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 GATA4P43694 442 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 UCP3P55916 312 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 ADIPOQQ15848 244 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 LPCAT3Q6P1A2 487 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 CLEC18BQ6UXF7 455 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 C9orf62Q8N4C0 152 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 OR5M8Q8NGP6 311 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 CASTOR1Q8WTX7 329 aa18.58■□□□□ 0.57
CCDC7-201ENST00000277657 IFNL4K9M1U5 179 aa18.58■□□□□ 0.56
CCDC7-201ENST00000277657 ZNF728P0DKX0 622 aa18.58■□□□□ 0.56
CCDC7-201ENST00000277657 CEBPDP49716 269 aaPredicted RBP18.58■□□□□ 0.56
CCDC7-201ENST00000277657 IFITM2Q01629 132 aa18.58■□□□□ 0.56
CCDC7-201ENST00000277657 C5orf24Q7Z6I8 188 aa18.58■□□□□ 0.56
CCDC7-201ENST00000277657 CLEC4MQ9H2X3 399 aaPredicted RBP18.58■□□□□ 0.56
CCDC7-201ENST00000277657 ZDHHC8Q9ULC8 765 aa18.58■□□□□ 0.56
CCDC7-201ENST00000277657 A0A0B4J2A0 478 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 IGKV1-6A0A0C4DH72 117 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 FAM90A27PA6NNH2 459 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.57■□□□□ 0.56
CCDC7-201ENST00000277657 PSPNO60542 156 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 IGHV1-46P01743 117 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 RCC1P18754 421 aaPredicted RBP18.57■□□□□ 0.56
CCDC7-201ENST00000277657 AADACP22760 399 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 SRSF4Q08170 494 aaKnown RBP18.57■□□□□ 0.56
CCDC7-201ENST00000277657 NCMAPQ5T1S8 102 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 MOB1BQ7L9L4 216 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 FAM90A1Q86YD7 464 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 ITLN1Q8WWA0 313 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 ESRP2Q9H6T0 727 aaKnown RBP18.57■□□□□ 0.56
CCDC7-201ENST00000277657 IL19Q9UHD0 177 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 SHPKQ9UHJ6 478 aa18.57■□□□□ 0.56
CCDC7-201ENST00000277657 RGS11O94810 467 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 PPYP01298 95 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 TK1P04183 234 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 NFYAP23511 347 aaPredicted RBP18.56■□□□□ 0.56
CCDC7-201ENST00000277657 HLA-DRB3P79483 266 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 LIN54Q6MZP7 749 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 OR4A4PQ8NGN8 299 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms