RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 EML6Q6ZMW3 1958 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 KIAA2026Q5HYC2 2103 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 Q3ZCU0 254 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF818PQ6ZRF7 136 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 OSR2Q8N2R0 312 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 IL22RA1Q8N6P7 574 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 CABLES2Q9BTV7 478 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 ULBP2Q9BZM5 246 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 C8orf33Q9H7E9 229 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-202ENST00000273342 DECR2Q9NUI1 292 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 CYTIPO60759 359 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 SCTP09683 121 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 MAS1LP35410 378 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 ALDH3B1P43353 468 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 TGIF2LXQ8IUE1 241 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 ODF3L1Q8IXM7 274 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF100Q8IYN0 542 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 OR51H1Q8NH63 302 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 PISDQ9UG56 409 aa11.15□□□□□ -0.62
COL8A1-202ENST00000273342 TRDCB7Z8K6 153 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 PTBP3O95758 552 aaKnown RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 IGHV3-9P01782 118 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 B4GALT1P15291 398 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CCNOP22674 350 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 PTGDSP41222 190 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CASP6P55212 293 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 MALLQ13021 153 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 SHBQ15464 509 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CALHM1Q8IU99 346 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 C1orf87Q8N0U7 546 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 RNASE11Q8TAA1 199 aaKnown RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 UBALD1Q8TB05 177 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 MOB3AQ96BX8 217 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 ALKBH3Q96Q83 286 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 SLC25A31Q9H0C2 315 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 FSCN3Q9NQT6 498 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 IL36RNQ9UBH0 155 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 NCOR1O75376 2440 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 IGKV1D-13A0A0B4J2D9 117 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CEBPZOSA8MTT3 80 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 DHHO43323 396 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 GDF9O60383 454 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 NRASP01111 189 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 IGKV1-13P0DP09 117 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 IAPPP10997 89 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 G0S2P27469 103 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 ELLP55199 621 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 ERVS71-1P61550 626 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 ADIRFQ15847 76 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 PLCXD3Q63HM9 321 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 RTL6Q6ICC9 239 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 SLC25A26Q70HW3 274 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CCDC71LQ8N9Z2 235 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 OR2M3Q8NG83 312 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 SPTSSAQ969W0 71 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 TMEM222Q9H0R3 208 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CCL28Q9NRJ3 127 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 LYRM2Q9NU23 88 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 MYOTQ9UBF9 498 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 WASF3Q9UPY6 502 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 A0A0U1RQV5 110 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 AQP7P3A6NL99 342 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 SLC31A2O15432 143 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 PITX3O75364 302 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CCR5P51681 352 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 SSTP61278 116 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 PKIAP61925 76 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 CLN3Q13286 438 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 GPR137CQ8N3F9 429 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF501Q96CX3 271 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-202ENST00000273342 RPRMQ9NS64 109 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 PLA2G3Q9NZ20 509 aa11.14□□□□□ -0.63
COL8A1-202ENST00000273342 TLE4Q04727 773 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF124Q15973 351 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 PLXDC1Q8IUK5 500 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
COL8A1-202ENST00000273342 LURAP1Q96LR2 239 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 BCO1Q9HAY6 547 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
COL8A1-202ENST00000273342 SOX15O60248 233 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
COL8A1-202ENST00000273342 TCN2P20062 427 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 LTBRP36941 435 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 PRSS8Q16651 343 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 HIST3H3Q16695 136 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 NABP1Q96AH0 204 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 DOCK7Q96N67 2140 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 OR6C1Q96RD1 312 aa11.13□□□□□ -0.63
COL8A1-202ENST00000273342 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 CLDN34H7C241 214 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 DUX1O43812 170 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms