RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TSTD3H0UI37 97 aa13.46□□□□□ -0.26
TIMP3-201ENST00000266085 VDAC1P21796 283 aa13.46□□□□□ -0.26
TIMP3-201ENST00000266085 KIAA0141Q14154 515 aaPredicted RBP13.46□□□□□ -0.26
TIMP3-201ENST00000266085 PIGYQ3MUY2 71 aa13.46□□□□□ -0.26
TIMP3-201ENST00000266085 NCBP2LA6PVI3 153 aaKnown RBP13.45□□□□□ -0.26
TIMP3-201ENST00000266085 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 KLF9Q13886 244 aaPredicted RBP13.45□□□□□ -0.26
TIMP3-201ENST00000266085 SKA3Q8IX90 412 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 MITD1Q8WV92 249 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 TRIM77I1YAP6 450 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 NDUFA6P56556 154 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 ADTRPQ96IZ2 230 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 IGKV3D-11A0A0A0MRZ8 115 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 FAM24AA6NFZ4 105 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 AHRRA9YTQ3 701 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 HPXP02790 462 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 P2RY6Q15077 328 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 TVP23CQ96ET8 276 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 ANK1P16157 1881 aa13.45□□□□□ -0.26
TIMP3-201ENST00000266085 OOEPA6NGQ2 149 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 ZNHIT1O43257 154 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 COX7A1P24310 79 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 MRPS11P82912 194 aaKnown RBP13.44□□□□□ -0.26
TIMP3-201ENST00000266085 COMMD1Q8N668 190 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 RNF7Q9UBF6 113 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 METTL15P1P0C7V9 234 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 FSTP19883 344 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 PRRX1P54821 245 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 UBE2G2P60604 165 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 CD300CQ08708 224 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 KRTCAP3Q53RY4 240 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 SLC25A47Q6Q0C1 308 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 DBX2Q6ZNG2 339 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 PRR33A8MZF0 331 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 RPS2P15880 293 aaKnown RBP13.44□□□□□ -0.26
TIMP3-201ENST00000266085 CXCL3P19876 107 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 ETV3LQ6ZN32 361 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 TBC1D26Q86UD7 250 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 BPIFCQ8NFQ6 507 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 SLC2A9Q9NRM0 540 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 LANCL1O43813 399 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 FGF2P09038 288 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 SSTP61278 116 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 TMEM267Q0VDI3 215 aaPredicted RBP13.44□□□□□ -0.26
TIMP3-201ENST00000266085 TEX30Q5JUR7 227 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 C1orf185Q5T7R7 199 aa13.44□□□□□ -0.26
TIMP3-201ENST00000266085 RECKO95980 971 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 POLR2GP62487 172 aaKnown RBP eCLIP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 TAGLNQ01995 201 aaKnown RBP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 OR4S2Q8NH73 311 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 CABLES2Q9BTV7 478 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 FBXL17Q9UF56 701 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 TRAV39A0A0B4J263 110 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 CRHP06850 196 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 CRYBA2P53672 197 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF90Q03938 601 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 MIDNQ504T8 468 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 LIAT1Q6ZQX7 453 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 SLC25A42Q86VD7 318 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 MOB3AQ96BX8 217 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 PRSS50Q9UI38 385 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 A0A1W2PNV4 684 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 DVL1O14640 695 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 SCGB1D1O95968 90 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 CEACAM3P40198 252 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 DVL1P1P54792 670 aaPredicted RBP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 EGR4Q05215 589 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 AANATQ16613 207 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 CD200R1LQ6Q8B3 271 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 NEIL1Q96FI4 390 aaPredicted RBP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 PGLYRP3Q96LB9 341 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 LRFN3Q9BTN0 628 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 OPN3Q9H1Y3 402 aaPredicted RBP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 MRPL22Q9NWU5 206 aaKnown RBP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 TRBV5-5A0A0J9YX44 114 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 C20orf202A1L168 122 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 PMELP40967 661 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 KIR2DS2P43631 304 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 TLE1Q04724 770 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 TMEM104Q8NE00 496 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 CXorf58Q96LI9 332 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 NXF2Q9GZY0 626 aaKnown RBP13.43□□□□□ -0.26
TIMP3-201ENST00000266085 OPN4Q9UHM6 478 aa13.43□□□□□ -0.26
TIMP3-201ENST00000266085 TMEM210A6NLX4 147 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 CDX4O14627 284 aaPredicted RBP13.42□□□□□ -0.26
TIMP3-201ENST00000266085 NCR3LG1Q68D85 454 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 TIPARPQ7Z3E1 657 aaKnown RBP13.42□□□□□ -0.26
TIMP3-201ENST00000266085 GAPTQ8N292 157 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 FDCSPQ8NFU4 85 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 HOXD4P09016 255 aaPredicted RBP13.42□□□□□ -0.26
TIMP3-201ENST00000266085 INHBBP09529 407 aa13.42□□□□□ -0.26
TIMP3-201ENST00000266085 SFTPCP11686 197 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms