RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 A8MWP6 167 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 NPSP0C0P6 89 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 FPR2P25090 351 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HLA-DRB5Q30154 266 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 CST9Q5W186 159 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 TMEFF1Q8IYR6 380 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 C9orf170A2RU37 121 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 TMEM238C9JI98 176 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 EFNB1P98172 346 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 BSXQ3C1V8 233 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 OCIAD2Q56VL3 154 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 DGAT2L6Q6ZPD8 337 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 Q8IYB0 196 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 PLA2G12AQ9BZM1 189 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SLC17A4Q9Y2C5 497 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 LAMTOR2Q9Y2Q5 125 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SDCBPO00560 298 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 OR11G2Q8NGC1 345 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 ZNF764Q96H86 408 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 TAAR6Q96RI8 345 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 LPAR5Q9H1C0 372 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 KIAA1456Q9P272 454 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 BMPR1BO00238 502 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SLC25A6P12236 298 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 PNLIPRP2P54317 469 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 WNT3P56703 355 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SLC37A2Q8TED4 501 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 DMRTA2Q96SC8 542 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 AKIRIN1Q9H9L7 192 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 SEBOXQ9HB31 216 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 ZNF346Q9UL40 294 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 CLEC18AA5D8T8 446 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 GAPDHP04406 335 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 TCTAP57738 103 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 TRMT12Q53H54 448 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 CLEC18CQ8NCF0 446 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 OR1L6Q8NGR2 347 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 OR51E1Q8TCB6 317 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 RHBDD1Q8TEB9 315 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 DYNLRB1Q9NP97 96 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 K7ESM1 405 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 M0R135 149 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 RPS23P62266 143 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 OR5B3Q8NH48 314 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 ZNF296Q8WUU4 475 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 ZNF799Q96GE5 643 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BKO60814 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 CTAG2O75638 210 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 GOSR1O95249 250 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BJP06899 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HOXC4P09017 264 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BOP23527 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BBP33778 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 TCL1AP56279 114 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BDP58876 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BCP62807 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST2H2BEQ16778 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 DEFB133Q30KQ1 61 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 OR1N1Q8NGS0 311 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 FGF14Q92915 247 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BHQ93079 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BNQ99877 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BMQ99879 126 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 FAM173AQ9BQD7 235 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 UBE2ZQ9H832 354 aaPredicted RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 FGF21Q9NSA1 209 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HMGA1P17096 107 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 ERHP84090 104 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 ZNF880Q6PDB4 577 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 KCNE4Q8WWG9 221 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 S1PR3Q99500 378 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 WDR13Q9H1Z4 485 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 OR2D2Q9H210 308 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 FAM206AQ9NX38 181 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 PSENENQ9NZ42 101 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 MTCH1Q9NZJ7 389 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 HTR1DP28221 377 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 ZNF77Q15935 545 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 CA13Q8N1Q1 262 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SIRT6Q8N6T7 355 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 NEU1Q99519 415 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SIGLEC7Q9Y286 467 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 CAPZBP47756 277 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 SHBQ15464 509 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ABHD3Q8WU67 409 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ZNRF4Q8WWF5 429 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 PIMREGQ9BSJ6 248 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TBC1D29Q9UFV1 150 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 HS3ST1O14792 307 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 OR8B8Q15620 311 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 NUDT8Q8WV74 236 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 MS4A4AQ96JQ5 239 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 HEXA-AS1Q9H8Q6 139 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 A0A087WUJ7 227 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TMEM272A0A1B0GTI8 110 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ZC3H12DA2A288 527 aaKnown RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 OR8I2Q8N0Y5 310 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 SLC22A13Q9Y226 551 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms