RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 SCGNO76038 276 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 PTHLHP12272 177 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 CDNFQ49AH0 187 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 TMEM69Q5SWH9 247 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 MAPK1IP1LQ8NDC0 245 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 NEK7Q8TDX7 302 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 ST8SIA4Q92187 359 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 NUDT16L1Q9BRJ7 211 aaKnown RBP20.22■□□□□ 0.83
SCN1B-201ENST00000262631 REG4Q9BYZ8 158 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 FAM234AQ9H0X4 552 aa20.22■□□□□ 0.83
SCN1B-201ENST00000262631 NDUFB7P17568 137 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 S100A5P33763 92 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 TAS2R20P59543 309 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 AESQ08117 197 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 EDDM3AQ14507 147 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 ZNF260Q3ZCT1 412 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 LRRC10Q5BKY1 277 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 TPRX1Q8N7U7 411 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 COQ2Q96H96 371 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 ADAM30Q9UKF2 790 aa20.21■□□□□ 0.83
SCN1B-201ENST00000262631 TMEM235A6NFC5 223 aa20.2■□□□□ 0.82
SCN1B-201ENST00000262631 CSN2P05814 226 aa20.2■□□□□ 0.82
SCN1B-201ENST00000262631 WDR25Q64LD2 544 aaPredicted RBP20.2■□□□□ 0.82
SCN1B-201ENST00000262631 HDHD3Q9BSH5 251 aaPredicted RBP20.2■□□□□ 0.82
SCN1B-201ENST00000262631 CLN8Q9UBY8 286 aa20.2■□□□□ 0.82
SCN1B-201ENST00000262631 AK3Q9UIJ7 227 aa20.2■□□□□ 0.82
SCN1B-201ENST00000262631 MRPS7Q9Y2R9 242 aaKnown RBP20.2■□□□□ 0.82
SCN1B-201ENST00000262631 H3BUI4 141 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 HLA-DQB1P01920 261 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 CCDC190Q86UF4 302 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 GCDHQ92947 438 aaPredicted RBP20.19■□□□□ 0.82
SCN1B-201ENST00000262631 PAIP2BQ9ULR5 123 aaKnown RBP20.19■□□□□ 0.82
SCN1B-201ENST00000262631 ITPR3Q14573 2671 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 MYO9AB2RTY4 2548 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 FAM157AC9JC47 383 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 MGST3O14880 152 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 GLAP06280 429 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 ZFP36P26651 326 aaKnown RBP20.19■□□□□ 0.82
SCN1B-201ENST00000262631 TALDO1P37837 337 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 RBM39Q14498 530 aaKnown RBP20.19■□□□□ 0.82
SCN1B-201ENST00000262631 RSBN1Q5VWQ0 802 aaPredicted RBP20.19■□□□□ 0.82
SCN1B-201ENST00000262631 GDPD3Q7L5L3 318 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 OR5D13Q8NGL4 314 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 PPP1R35Q8TAP8 253 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 COX4I2Q96KJ9 171 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 SSBP3Q9BWW4 388 aaPredicted RBP20.19■□□□□ 0.82
SCN1B-201ENST00000262631 AUNIPQ9H7T9 357 aa20.19■□□□□ 0.82
SCN1B-201ENST00000262631 A0A0G2JMP0 313 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 A0A0X1KG70 313 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 MEX3AA1L020 520 aaKnown RBP20.18■□□□□ 0.82
SCN1B-201ENST00000262631 GLIPR1P48060 266 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 EDDM3BP56851 147 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 GNB2P62879 340 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 ESCO2Q56NI9 601 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 OR4M2Q8NGB6 313 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 RAB39BQ96DA2 213 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 ABHD1Q96SE0 405 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.18■□□□□ 0.82
SCN1B-201ENST00000262631 MED13LQ71F56 2210 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 MALRD1Q5VYJ5 2156 aa20.18■□□□□ 0.82
SCN1B-201ENST00000262631 CELSR1Q9NYQ6 3014 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 TEX15Q9BXT5 2789 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 KIAA1324LA8MWY0 1029 aaPredicted RBP20.17■□□□□ 0.82
SCN1B-201ENST00000262631 LOXL1Q08397 574 aaPredicted RBP20.17■□□□□ 0.82
SCN1B-201ENST00000262631 CBX3Q13185 183 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 KRBOX4Q5JUW0 171 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 ZNF497Q6ZNH5 498 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 Q6ZPA2 131 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 SNX29P2Q8IUI4 249 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 CIARTQ8N365 385 aaPredicted RBP20.17■□□□□ 0.82
SCN1B-201ENST00000262631 SOSTQ9BQB4 213 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 V9GYH0 126 aa20.17■□□□□ 0.82
SCN1B-201ENST00000262631 ATP6V1G1O75348 118 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 GSTP1P09211 210 aaKnown RBP20.16■□□□□ 0.82
SCN1B-201ENST00000262631 KCNJ3P48549 501 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 P2RX3P56373 397 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 HACD4Q5VWC8 232 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 BTN2A1Q7KYR7 527 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 NUDCD2Q8WVJ2 157 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 H1FXQ92522 213 aaKnown RBP20.16■□□□□ 0.82
SCN1B-201ENST00000262631 KIF25Q9UIL4 384 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 TRAV39A0A0B4J263 110 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 FABP12A6NFH5 140 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 SERPINE3A8MV23 424 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 C22orf46C9J442 243 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 MELTFP08582 738 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 NPY4RP50391 375 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 PAX5Q02548 391 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 DCTN5Q9BTE1 182 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 C19orf12Q9NSK7 152 aa20.16■□□□□ 0.82
SCN1B-201ENST00000262631 MEIOCA2RUB1 952 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 MT-ND4P03905 459 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 LCN2P80188 198 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 GUCA2AQ02747 115 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 GAPTQ8N292 157 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 OR4K15Q8NH41 348 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 CMSS1Q9BQ75 279 aaKnown RBP20.15■□□□□ 0.82
SCN1B-201ENST00000262631 LPAR2Q9HBW0 351 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 ZANQ9Y493 2812 aa20.15■□□□□ 0.82
SCN1B-201ENST00000262631 SSX5O60225 188 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms