RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IL19Q9UHD0 177 aa23.21■■□□□ 1.31
SMARCD3-201ENST00000262188 TCRBP04435 133 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 FOLR2P14207 255 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 GUCA2BQ16661 112 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 SLC22A6Q4U2R8 563 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 SVBPQ8N300 66 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 PNLDC1Q8NA58 520 aaKnown RBP23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 ZNF671Q8TAW3 534 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 FAM3DQ96BQ1 224 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 NUDT15Q9NV35 164 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 C1orf123Q9NWV4 160 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 MTCH1Q9NZJ7 389 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 CDC14BO60729 498 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 NDUFS7O75251 213 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 TNFSF4P23510 183 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 CAPZA1P52907 286 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 C2orf76Q3KRA6 126 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 SPAG16Q8N0X2 631 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 DECR2Q9NUI1 292 aa23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 NOP16Q9Y3C1 178 aaKnown RBP23.2■■□□□ 1.3
SMARCD3-201ENST00000262188 TMEM210A6NLX4 147 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 UBE2CO00762 179 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 HEXAP06865 529 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 SFTPBP07988 381 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 BTCP35070 178 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 SRP9P49458 86 aaKnown RBP23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 EFNB2P52799 333 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 CDNFQ49AH0 187 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 TMEM104Q8NE00 496 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 COQ8AQ8NI60 647 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 SEH1LQ96EE3 360 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 SAP30LQ9HAJ7 183 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 GCM1Q9NP62 436 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 SPG11Q96JI7 2443 aa23.19■■□□□ 1.3
SMARCD3-201ENST00000262188 LYNX1G3V0Z9 82 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 ADH4P08319 380 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 LYNX1P0DP58 116 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 BCL3P20749 454 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 SERPINA2P20848 420 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 NFYAP23511 347 aaPredicted RBP23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 SPICQ8N5J4 248 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 ALX4Q9H161 411 aaPredicted RBP23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 BANF2Q9H503 90 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 HMSDA8MTL9 139 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 J3QT63 122 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 ATG12O94817 140 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 PPOXP50336 477 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 WDR82Q6UXN9 313 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 BTN2A1Q7KYR7 527 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 C14orf79Q96F83 325 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 IL36RNQ9UBH0 155 aa23.18■■□□□ 1.3
SMARCD3-201ENST00000262188 TMEM272A0A1B0GTI8 110 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 WNT9BO14905 357 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 CD55P08174 381 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 GIPP09681 153 aaPredicted RBP23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 VSIG8P0DPA2 414 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 S100A11P31949 105 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 RAP2BP61225 183 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 UNC119Q13432 240 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 MADCAM1Q13477 382 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 FAM201AQ5SY85 155 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 OR56B4Q8NH76 319 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 EDARADDQ8WWZ3 215 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 TLNRD1Q9H1K6 362 aa23.17■■□□□ 1.3
SMARCD3-201ENST00000262188 ZNF205O95201 554 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 PTBP3O95758 552 aaKnown RBP23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 SNU13P55769 128 aaKnown RBP23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 RAB5BP61020 215 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 C4orf46Q504U0 113 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 BOLLQ8N9W6 283 aaKnown RBP23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 CYYR1Q96J86 154 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 DIRC2Q96SL1 478 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 THAP7Q9BT49 309 aaPredicted RBP23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 WDR13Q9H1Z4 485 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 MCRIP1C9JLW8 97 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 SSNA1O43805 119 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 MPZP25189 248 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 CFPP27918 469 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 RSU1Q15404 277 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 BIVMQ86UB2 503 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 CPNE2Q96FN4 548 aaPredicted RBP23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 S100A13Q99584 98 aa23.16■■□□□ 1.3
SMARCD3-201ENST00000262188 DYSFO75923 2080 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 KDM4BO94953 1096 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 CYB5R3P00387 301 aaPredicted RBP23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 EGR1P18146 543 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 QRFPP83859 136 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 IL24Q13007 206 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 LRRC29Q8WV35 223 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 PKIBQ9C010 78 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 PPP1R3CQ9UQK1 317 aa23.15■■□□□ 1.3
SMARCD3-201ENST00000262188 SPCS3P61009 180 aa23.14■■□□□ 1.3
SMARCD3-201ENST00000262188 MZT1Q08AG7 82 aa23.14■■□□□ 1.3
SMARCD3-201ENST00000262188 SAMD12Q8N8I0 201 aa23.14■■□□□ 1.3
SMARCD3-201ENST00000262188 CCL19Q99731 98 aa23.14■■□□□ 1.3
SMARCD3-201ENST00000262188 ZNF581Q9P0T4 197 aa23.14■■□□□ 1.3
SMARCD3-201ENST00000262188 ABCA12Q86UK0 2595 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 HECTD1Q9ULT8 2610 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 CRTAPO75718 401 aaPredicted RBP23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 SPP1P10451 314 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms