RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 RREB1Q92766 1687 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 PAGE4O60829 102 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 KLK2P20151 261 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 NPY1RP25929 384 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 RIPPLY2Q5TAB7 128 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 NUDT10Q8NFP7 164 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 HMGCLL1Q8TB92 370 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 SCN4AP35499 1836 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 MOSPD3O75425 235 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 LIAT1Q6ZQX7 453 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 NT5CQ8TCD5 201 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 LDLRAD1Q5T700 205 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 DUSP13Q9UII6 198 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 SNURFLB1AK76 121 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 KLRC4-KLRK1H3BQV0 150 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 SFTPCP11686 197 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 B4GALT1P15291 398 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 PARM1Q6UWI2 310 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 AP5S1Q9NUS5 200 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 CXorf51AA0A1B0GTR3 108 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 LOC390937A0A1W2PQ73 354 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 TRGC1P0CF51 173 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 KTI12Q96EK9 354 aaPredicted RBP6.36□□□□□ -1.39
HERC2-201ENST00000261609 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 ZNF391Q9UJN7 358 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 RIF1Q5UIP0 2472 aaKnown RBP6.36□□□□□ -1.39
HERC2-201ENST00000261609 OR4C46A6NHA9 309 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 CTSSP25774 331 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 FZD5Q13467 585 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 CNRIP1Q96F85 164 aaPredicted RBP6.36□□□□□ -1.39
HERC2-201ENST00000261609 A0A1W2PNR3 127 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 KIRREL2Q6UWL6 708 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 WFDC5Q8TCV5 224 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 ZNF707Q96C28 371 aaPredicted RBP6.36□□□□□ -1.39
HERC2-201ENST00000261609 C4orf45Q96LM5 186 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 DOT1LQ8TEK3 1739 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 SMPD2O60906 423 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 HLA-GP17693 338 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 G6PCP35575 357 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 OR3A4PP47883 348 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 PNLIPRP2P54317 469 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 SLC7A10Q9NS82 523 aa6.36□□□□□ -1.39
HERC2-201ENST00000261609 IGHV3-64DA0A0J9YX35 117 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 NCBP2LA6PVI3 153 aaKnown RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 SLC25A5P05141 298 aaKnown RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 ZBTB25P24278 435 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 SPINK9Q5DT21 86 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 TSPO2Q5TGU0 170 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 OR1F12Q8NHA8 337 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 R3HDM4Q96D70 268 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 PLAC1Q9HBJ0 212 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 OR5AC2Q9NZP5 309 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 FRRS1LQ9P0K9 344 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 OR2T6Q8NHC8 308 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 SLC37A2Q8TED4 501 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 RNF133Q8WVZ7 376 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 OCIAD1Q9NX40 245 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 CES1P1Q9UKY3 287 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 ZNF256Q9Y2P7 627 aaPredicted RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 SOX21Q9Y651 276 aaPredicted RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 DDX60LQ5H9U9 1706 aaKnown RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 TRDCB7Z8K6 153 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 RER1O15258 196 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 C1QL1O75973 258 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 NPBWR2P48146 333 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 TMEM50BP56557 158 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 TBC1D26Q86UD7 250 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 UBE2ZQ9H832 354 aaPredicted RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 METTL12A8MUP2 240 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 SLC25A34Q6PIV7 304 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 C17orf99Q6UX52 265 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 ST6GALNAC3Q8NDV1 305 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 C14orf144Q96I85 54 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 RNF2Q99496 336 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 PMCHL2Q9BQD1 86 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 TRGV10A0A0A0MS01 117 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 GAPDHP04406 335 aaKnown RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 TMIGD3P0DMS9 266 aaPredicted RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 LSM11P83369 360 aaKnown RBP eCLIP6.35□□□□□ -1.39
HERC2-201ENST00000261609 ADPRHP54922 357 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 ZXDAP98168 799 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 SCGB1D4Q6XE38 83 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 ADAMTS17Q8TE56 1095 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 LINC00615Q96LM1 132 aaPredicted RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 ZNF430Q9H8G1 570 aaPredicted RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 IGSF23A1L1A6 192 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 OR1D5P58170 312 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 GUCD1Q96NT3 240 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 KCNK15Q9H427 330 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 MARCH5Q9NX47 278 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 TMEM265A0A087WTH1 108 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 IGHV3-20A0A0C4DH32 117 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 PITX3O75364 302 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 CXorf1O96002 111 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 LYZL2Q7Z4W2 148 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 YRDCQ86U90 279 aaKnown RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 C5orf17Q8NAS9 161 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 MYOZ3Q8TDC0 251 aa6.35□□□□□ -1.39
HERC2-201ENST00000261609 DNAJB12Q9NXW2 375 aaKnown RBP6.35□□□□□ -1.39
HERC2-201ENST00000261609 KCNE1BA0A087WTH5 132 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms