RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 ALDH3B1P43353 468 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 RBM11P57052 281 aaKnown RBP13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 PCBD1P61457 104 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 S100A12P80511 92 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 EXT1Q16394 746 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 RAB39BQ96DA2 213 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 MSI2Q96DH6 328 aaKnown RBP13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 GINS3Q9BRX5 216 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 C5orf52A6NGY3 159 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 CTSSP25774 331 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 FGF8P55075 233 aaPredicted RBP13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 RAC3P60763 192 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 CLEC12BQ2HXU8 276 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 CRIP3Q6Q6R5 217 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 OR5T1Q8NG75 326 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 PSMF1Q92530 271 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 OR2H1Q9GZK4 316 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 UBE2ZQ9H832 354 aaPredicted RBP13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 HS3ST3B1Q9Y662 390 aa13.98□□□□□ -0.17
SNCAIP-202ENST00000261368 OR6C6A6NF89 314 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 ZNF732B4DXR9 585 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 CLN5O75503 358 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 SLC34A2O95436 690 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 EDN3P14138 238 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 ELLP55199 621 aaPredicted RBP13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 RND3P61587 244 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 BOD1Q96IK1 185 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 IGLV3-32A0A0A0MS00 114 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 CD63P08962 238 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 RFPL3SP0C7P2 107 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 MDKP21741 143 aaPredicted RBP13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 NKX6-1P78426 367 aaPredicted RBP13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 SRPXP78539 464 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 DLK1P80370 383 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 LILRB2Q8N423 598 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 SSC4DQ8WTU2 575 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 INTS12Q96CB8 462 aaKnown RBP13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 TOLLIPQ9H0E2 274 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 ZDHHC8Q9ULC8 765 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 HSF4Q9ULV5 492 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 ATG2AQ2TAZ0 1938 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 FOXI3A8MTJ6 420 aaPredicted RBP13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 TRDCB7Z8K6 153 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 SYNGR3O43761 229 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 H3F3AP84243 136 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 RNF212Q495C1 297 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 SLC23A3Q6PIS1 610 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 C10orf35Q96D05 121 aa13.97□□□□□ -0.17
SNCAIP-202ENST00000261368 ZNF587BE7ETH6 402 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 TOX3O15405 576 aaPredicted RBP13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 ZNF818PQ6ZRF7 136 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 DMBX1Q8NFW5 382 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 PPP1R3CQ9UQK1 317 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 HMGB3O15347 200 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 S100PP25815 95 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 ZNF239Q16600 458 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 MPV17LQ2QL34 196 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 ACER2Q5QJU3 275 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 MCEMP1Q8IX19 187 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.17
SNCAIP-202ENST00000261368 IGHV1-45A0A0A0MS14 117 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 RPS23P62266 143 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 TLE4Q04727 773 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 PRDX4Q13162 271 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 NTNG2Q96CW9 530 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 ANGPTL4Q9BY76 406 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 WNT5BQ9H1J7 359 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 CA11O75493 328 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 CST2P09228 141 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 NTF4P34130 210 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 RPS16P62249 146 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 RAB1AP62820 205 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 ARF1P84077 181 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 SPATA46Q5T0L3 261 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 MYPOPQ86VE0 399 aaPredicted RBP13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 OR10D4PQ8NGN7 298 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 A0A1W2PR80 420 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 FAM166BA8MTA8 275 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 ETV2O00321 342 aaPredicted RBP13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 DNASE2BQ8WZ79 361 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 PLK3Q9H4B4 646 aa13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 ERRFI1Q9UJM3 462 aaPredicted RBP13.95□□□□□ -0.18
SNCAIP-202ENST00000261368 CD300LBA8K4G0 201 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 LY86O95711 162 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 OR2B11Q5JQS5 317 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 ZNF100Q8IYN0 542 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 METTL15P1P0C7V9 234 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 SUCLG1P53597 346 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 BEND4Q6ZU67 534 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 GPR35Q9HC97 309 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 IGKV1D-13A0A0B4J2D9 117 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 CEBPZOSA8MTT3 80 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 WDR1O75083 606 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
SNCAIP-202ENST00000261368 IGKV1-13P0DP09 117 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms