RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 OCIAD1Q9NX40 245 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 DTX4Q9Y2E6 619 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 A0A1W2PQU0 124 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 OR2W5A6NFC9 320 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 BCAT2O15382 392 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 SOD3P08294 240 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 SRP19P09132 144 aaKnown RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 EPHA8P29322 1005 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 CLDN2P57739 230 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 ARL16Q0P5N6 197 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 Q56UQ5 140 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 PLPP4Q5VZY2 271 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 PLXDC1Q8IUK5 500 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM208Q9BTX3 173 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 RTL8AQ9BWD3 113 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 CES1P1Q9UKY3 287 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 WNT6Q9Y6F9 365 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 LINC01553A4QN01 128 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 H0YL77 283 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 H3BML4 177 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 PDCD6O75340 191 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 S1PR2O95136 353 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 HOXC4P09017 264 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 CD22P20273 847 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 CD226Q15762 336 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 PLAC9Q5JTB6 97 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 C6orf201Q7Z4U5 140 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 AMER3Q8N944 861 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 ALG14Q96F25 216 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 MARS2Q96GW9 593 aaKnown RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 CDCA3Q99618 268 aaPredicted RBP7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 GPR62Q9BZJ7 368 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 JKAMPQ9P055 326 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 ICAM5Q9UMF0 924 aa7.37□□□□□ -1.23
SNCAIP-201ENST00000261367 GOLGA4Q13439 2230 aaKnown RBP7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 FAM90A26D6RGX4 464 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 NTSR1P30989 418 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 CLDN17P56750 224 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SEC11AP67812 179 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SMAD4Q13485 552 aaKnown RBP7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 ZNF141Q15928 474 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 ANKRD55Q3KP44 614 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 CLDN23Q96B33 292 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 MISP3Q96FF7 219 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM38BQ9NVV0 291 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 IGSF23A1L1A6 192 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 M0R135 149 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 DHRS3O75911 302 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 P04436 131 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 KISS1Q15726 138 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 KIRREL2Q6UWL6 708 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 MARCH3Q86UD3 253 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 RTN4RL1Q86UN2 441 aaPredicted RBP7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 Q8WTZ3 238 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 ZNF799Q96GE5 643 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 OXGR1Q96P68 337 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SLC25A22Q9H936 323 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SLC7A10Q9NS82 523 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 ST3GAL6Q9Y274 331 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SH2D1BO14796 132 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 HERVK_113P61574 105 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 ZNF260Q3ZCT1 412 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 IP6K3Q96PC2 410 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM106BQ9NUM4 274 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 COL4A4P53420 1690 aaPredicted RBP7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 NXPH3O95157 252 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 GCH1P30793 250 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 OPRM1P35372 400 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 MPLP40238 635 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 COL10A1Q03692 680 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 TSEN54Q7Z6J9 526 aaKnown RBP7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 LINC00596Q86U02 117 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 VASH2Q86V25 355 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 NPEPL1Q8NDH3 523 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 CNRIP1Q96F85 164 aaPredicted RBP7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 KLHDC7BQ96G42 594 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SMIM14Q96QK8 99 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 HS3ST3A1Q9Y663 406 aa7.36□□□□□ -1.23
SNCAIP-201ENST00000261367 TRAV14DV4A0A0A6YYC5 116 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 A8MWP6 167 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 TMEM262E9PQX1 116 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 ZFAND5O76080 213 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 IL3RAP26951 378 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 OTX2P32243 289 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 CCSMST1Q4G0I0 132 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 TNFRSF14Q92956 283 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 GNG12Q9UBI6 72 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 SHROOM3Q8TF72 1996 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 LOC102724200A0A096LPH7 203 aaPredicted RBP7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 A0A0A6YYC8 382 aaPredicted RBP7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 FRG2CA6NGY1 282 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 CRYM-AS1A6NIL9 109 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 I3L1I5 382 aaPredicted RBP7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 CHST1O43916 411 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 COX7A2P2O60397 106 aa7.35□□□□□ -1.23
SNCAIP-201ENST00000261367 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms