RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 APOBEC4Q8WW27 367 aaKnown RBP10.63□□□□□ -0.71
COL8A1-201ENST00000261037 NUP205Q92621 2012 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 A0A1W2PPV9 198 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 A0A1W2PQD3 144 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 ACP1P24666 158 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 SLC25A30Q5SVS4 291 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 ZNF488Q96MN9 340 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 THYN1Q9P016 225 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 NTMQ9P121 344 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 ANXA10Q9UJ72 324 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 GSTZ1O43708 216 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-201ENST00000261037 IL11P20809 199 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 GALP22466 123 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 CD40P25942 277 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 TMEM52Q8NDY8 209 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 RGP1Q92546 391 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-201ENST00000261037 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 SRD5A3Q9H8P0 318 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 RNF7Q9UBF6 113 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 GNG7O60262 68 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 BGLAPP02818 100 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 CTSDP07339 412 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-201ENST00000261037 AESQ08117 197 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 HDHD3Q9BSH5 251 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-201ENST00000261037 DNPH1O43598 174 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 OR2M3Q8NG83 312 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 MRPL24Q96A35 216 aaKnown RBP10.62□□□□□ -0.71
COL8A1-201ENST00000261037 FAM210BQ96KR6 192 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 NEURL2Q9BR09 285 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 RBFOX3A6NFN3 312 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 CLDN34H7C241 214 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 CD300CQ08708 224 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 MGAT2Q10469 447 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 GAB4Q2WGN9 574 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 MDP1Q86V88 176 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 ZPLD1Q8TCW7 415 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 CRISPLD2Q9H0B8 497 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 GLRX2Q9NS18 164 aa10.62□□□□□ -0.71
COL8A1-201ENST00000261037 M0R2Z0 102 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 RPS4Y1P22090 263 aaKnown RBP10.61□□□□□ -0.71
COL8A1-201ENST00000261037 SPCS3P61009 180 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
COL8A1-201ENST00000261037 DTD1Q8TEA8 209 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 SLC7A10Q9NS82 523 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 IGF2P01344 180 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 CELA2AP08217 269 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 OR4A4PQ8NGN8 299 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 EAF1Q96JC9 268 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-201ENST00000261037 TMEM204Q9BSN7 226 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 SF3B5Q9BWJ5 86 aaKnown RBP10.61□□□□□ -0.71
COL8A1-201ENST00000261037 ZNF665Q9H7R5 613 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 LRRC37AA6NMS7 1700 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 ARG1P05089 322 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 WNT5AP41221 380 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 NSUN5P2Q63ZY6 315 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 OR1L6Q8NGR2 347 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 PCDHGA9Q9Y5G4 932 aaKnown RBP10.61□□□□□ -0.71
COL8A1-201ENST00000261037 OGG1O15527 345 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 KCNAB3O43448 404 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 SYNGR2O43760 224 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 ORM1P02763 201 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 COL10A1Q03692 680 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 MPV17LQ2QL34 196 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 C10orf111Q8N326 155 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 RPS4Y2Q8TD47 263 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 CENPVL1A0A0U1RR11 272 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 C11orf94C9JXX5 98 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 PSG2P11465 335 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 DAOP14920 347 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 IQCJQ1A5X6 159 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 OR4D10Q8NGI6 311 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 OR5R1Q8NH85 324 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 TMUB1Q9BVT8 246 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 TTTY12Q9BZ98 90 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 V9GYH0 126 aa10.61□□□□□ -0.71
COL8A1-201ENST00000261037 C1QCP02747 245 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 HLA-GP17693 338 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 HLA-DRB3P79483 266 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 CARFQ8N187 725 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 TMEM38BQ9NVV0 291 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 MCM3APO60318 1980 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 J3QR89 54 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 LIFP15018 202 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 P2RY1P47900 373 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 IL24Q13007 206 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 SLC35E4Q6ICL7 350 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 PCGF1Q9BSM1 259 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 TECRQ9NZ01 308 aaKnown RBP10.6□□□□□ -0.71
COL8A1-201ENST00000261037 TRAV8-7A0A075B6U6 113 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 CCL21O00585 134 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 RHBDL1O75783 438 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 KIR2DL1P43626 348 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-201ENST00000261037 TCTAP57738 103 aa10.6□□□□□ -0.71
COL8A1-201ENST00000261037 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms