RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NLRC3Q7RTR2 1065 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 FAM234AQ9H0X4 552 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 SLC25A10Q9UBX3 287 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 AKAP9Q99996 3911 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 H3BUI4 141 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 NDUFB3O43676 98 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 CSN2P05814 226 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 GLAP06280 429 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 PTHLHP12272 177 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 ING3Q9NXR8 418 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 ITGB1BP2Q9UKP3 347 aa13.12□□□□□ -0.31
CCDC90B-201ENST00000260054 MED13LQ71F56 2210 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 MALRD1Q5VYJ5 2156 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 FUOMA2VDF0 154 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 TMEM235A6NFC5 223 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 RNF223E7ERA6 249 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 MGST3O14880 152 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 HLA-DQB1P01920 261 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 TALDO1P37837 337 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 BCAP31P51572 246 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 AESQ08117 197 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 RBM39Q14498 530 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 C16orf87Q6PH81 154 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 CCDC190Q86UF4 302 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 CENPSQ8N2Z9 138 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 TPRX1Q8N7U7 411 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 OR5D13Q8NGL4 314 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 PPP1R35Q8TAP8 253 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 COQ2Q96H96 371 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 REG4Q9BYZ8 158 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 AUNIPQ9H7T9 357 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.313e-11■■■■■ 43.7
CCDC90B-201ENST00000260054 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 AK3Q9UIJ7 227 aa13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 MRPS7Q9Y2R9 242 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-201ENST00000260054 SETXQ7Z333 2677 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 PHF1O43189 567 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 NDUFB7P17568 137 aa13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 RSBN1Q5VWQ0 802 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 LINC00299Q6ZSB3 139 aa13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 GCDHQ92947 438 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 SOSTQ9BQB4 213 aa13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 HDHD3Q9BSH5 251 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 V9GYH0 126 aa13.1□□□□□ -0.31
CCDC90B-201ENST00000260054 A0A0G2JMP0 313 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 A0A0X1KG70 313 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 SERPINE3A8MV23 424 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 BOLA2-SMG1P6H3BVE0 249 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 GSTP1P09211 210 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 MNDAP41218 407 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 GLIPR1P48060 266 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 KCNJ3P48549 501 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 EDDM3BP56851 147 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 GNB2P62879 340 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 ESCO2Q56NI9 601 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 HACD4Q5VWC8 232 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 OR4M2Q8NGB6 313 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 RAB39BQ96DA2 213 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 ABHD1Q96SE0 405 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 SSBP3Q9BWW4 388 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 MYO9AB2RTY4 2548 aa13.09□□□□□ -0.31
CCDC90B-201ENST00000260054 FABP12A6NFH5 140 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 CYSRT1A8MQ03 144 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 FAM157AC9JC47 383 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 MELTFP08582 738 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 ZFP36P26651 326 aaKnown RBP13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 NPY4RP50391 375 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 PAX5Q02548 391 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 LOXL1Q08397 574 aaPredicted RBP13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 IL18Q14116 193 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 ARL6IP1Q15041 203 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 RGS21Q2M5E4 152 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 KRBOX4Q5JUW0 171 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 ZNF497Q6ZNH5 498 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 Q6ZPA2 131 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 MINDY2Q8NBR6 621 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 MAPK1IP1LQ8NDC0 245 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.31
CCDC90B-201ENST00000260054 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 KIAA1324LA8MWY0 1029 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 ERP29P30040 261 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 ETV6P41212 452 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 P2RX3P56373 397 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 GUCA2AQ02747 115 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 SLC35E4Q6ICL7 350 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 GAPTQ8N292 157 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 MRPL30Q8TCC3 161 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 CMSS1Q9BQ75 279 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms