RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 IL22RA1Q8N6P7 574 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 OR1K1Q8NGR3 316 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 LMX1AQ8TE12 382 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
SDC1-201ENST00000254351 SYT3Q9BQG1 590 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 PLK3Q9H4B4 646 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 PLEKHF2Q9H8W4 249 aa12.44□□□□□ -0.42
SDC1-201ENST00000254351 A0A087WWC5 75 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 G3V3Y1 287 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 RPL36A-HNRNPH2H7BZ11 118 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 IGHMP01871 453 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 HSPB1P04792 205 aaKnown RBP12.43□□□□□ -0.42
SDC1-201ENST00000254351 GZMHP20718 246 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 PCP4P48539 62 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 DLX2Q07687 328 aaPredicted RBP12.43□□□□□ -0.42
SDC1-201ENST00000254351 THEM4Q5T1C6 240 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 NOXO1Q8NFA2 376 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 NUDT16L1Q9BRJ7 211 aaKnown RBP12.43□□□□□ -0.42
SDC1-201ENST00000254351 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
SDC1-201ENST00000254351 RABIFP47224 123 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 FAM3BP58499 235 aaPredicted RBP12.43□□□□□ -0.42
SDC1-201ENST00000254351 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 NEK7Q8TDX7 302 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 SMIM7Q9BQ49 75 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 SLC7A10Q9NS82 523 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 ST3GAL6Q9Y274 331 aa12.43□□□□□ -0.42
SDC1-201ENST00000254351 IGKV1-27A0A075B6S5 117 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 A0A0U1RQK1 487 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 FOXO1Q12778 655 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 OR4D5Q8NGN0 318 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 RBKSQ9H477 322 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 MTCH2Q9Y6C9 303 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 A0A1B0GU03 582 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 MPPED1O15442 326 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 DFFBO76075 338 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 ZNF41P51814 821 aaPredicted RBP12.42□□□□□ -0.42
SDC1-201ENST00000254351 GAPTQ8N292 157 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 Q96M66 194 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 LRRC61Q9BV99 259 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 OBP2AQ9NY56 170 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 FOXI3A8MTJ6 420 aaPredicted RBP12.42□□□□□ -0.42
SDC1-201ENST00000254351 PPP5D1E7EU14 171 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 CTHP32929 405 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 PHYHD1Q5SRE7 291 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 MRPL13Q9BYD1 178 aaKnown RBP12.42□□□□□ -0.42
SDC1-201ENST00000254351 METTL9Q9H1A3 318 aa12.42□□□□□ -0.42
SDC1-201ENST00000254351 DHRS3O75911 302 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 CYB5R3P00387 301 aaPredicted RBP12.41□□□□□ -0.42
SDC1-201ENST00000254351 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
SDC1-201ENST00000254351 EGR1P18146 543 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 ZNF100Q8IYN0 542 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 PRR18Q8N4B5 295 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 OR1N1Q8NGS0 311 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 IL22RA2Q969J5 263 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 TNFRSF10CO14798 259 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 PPYP01298 95 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 IFI6P09912 130 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 CAPZBP47756 277 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 OR5R1Q8NH85 324 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 SDSLQ96GA7 329 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 DKKL1Q9UK85 242 aa12.41□□□□□ -0.42
SDC1-201ENST00000254351 DMDP11532 3685 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 CACNA1DQ01668 2161 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 M0R135 149 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 PITX3O75364 302 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 FBLP22087 321 aaKnown RBP12.4□□□□□ -0.42
SDC1-201ENST00000254351 CHRNA7P36544 502 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 TFPI2P48307 235 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 DCAF7P61962 342 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 Q6ZPA2 131 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 ZNF818PQ6ZRF7 136 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 ZNF799Q96GE5 643 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 METTL7AQ9H8H3 244 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 MSL2Q9HCI7 577 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 LYRM2Q9NU23 88 aaPredicted RBP12.4□□□□□ -0.42
SDC1-201ENST00000254351 LCATP04180 440 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 ZFP36L1Q07352 338 aaKnown RBP12.4□□□□□ -0.42
SDC1-201ENST00000254351 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 D2HGDHQ8N465 521 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 BORCS8Q96FH0 119 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
SDC1-201ENST00000254351 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 ADAMTS9Q9P2N4 1935 aa12.4□□□□□ -0.42
SDC1-201ENST00000254351 IGKV1-12A0A0C4DH73 117 aa12.4□□□□□ -0.43
SDC1-201ENST00000254351 IFNA5P01569 189 aa12.4□□□□□ -0.43
SDC1-201ENST00000254351 IGKV1D-12P01611 117 aa12.4□□□□□ -0.43
SDC1-201ENST00000254351 SCTP09683 121 aa12.4□□□□□ -0.43
SDC1-201ENST00000254351 BCL2P10415 239 aa12.4□□□□□ -0.43
SDC1-201ENST00000254351 HNF1AP20823 631 aa12.4□□□□□ -0.43
SDC1-201ENST00000254351 LTBRP36941 435 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms