RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 THOC3Q96J01 351 aaKnown RBP10.36□□□□□ -0.75
USHBP1-201ENST00000252597 GFOD1Q9NXC2 390 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 STARD10Q9Y365 291 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 A0A0J9YW62 118 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 MPPED1O15442 326 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 WDR1O75083 606 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 GAPDHP04406 335 aaKnown RBP10.36□□□□□ -0.75
USHBP1-201ENST00000252597 IDH3GP51553 393 aaPredicted RBP10.36□□□□□ -0.75
USHBP1-201ENST00000252597 ERVFRD-1P60508 538 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 CCL7P80098 99 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 GAMTQ14353 236 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 ARL6IP1Q15041 203 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 SURF2Q15527 256 aaPredicted RBP10.36□□□□□ -0.75
USHBP1-201ENST00000252597 SPINK9Q5DT21 86 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 SPANXN5Q5MJ07 72 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF441Q8N8Z8 693 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 TMEM171Q8WVE6 324 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 PRRG4Q9BZD6 226 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 AQP7P3A6NL99 342 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 PGA5P0DJD9 388 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 PRF1P14222 555 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 MPZP25189 248 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
USHBP1-201ENST00000252597 IL22RA1Q8N6P7 574 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 PLA2G3Q9NZ20 509 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 METTL1Q9UBP6 276 aaKnown RBP10.36□□□□□ -0.75
USHBP1-201ENST00000252597 HS3ST3B1Q9Y662 390 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 ZFHX4Q86UP3 3567 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 LAMA5O15230 3695 aa10.36□□□□□ -0.75
USHBP1-201ENST00000252597 PIEZO2Q9H5I5 2752 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 FGFBP3Q8TAT2 258 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 ABHD3Q8WU67 409 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 SMOC1Q9H4F8 434 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 TINAGQ9UJW2 476 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 RNF150Q9ULK6 438 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 DCHS1Q96JQ0 3298 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 NXPH1P58417 271 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 PMP22Q01453 160 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 RHBDD2Q6NTF9 364 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
USHBP1-201ENST00000252597 FAM89BQ8N5H3 189 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 CCDC54Q8NEL0 328 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 A0A1W2PR77 199 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF587BE7ETH6 402 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 CARD18P57730 90 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 ERVS71-1P61550 626 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 IL15RAQ13261 267 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 OR56B2PQ8NGI1 322 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 OR1F12Q8NHA8 337 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 CABLES2Q9BTV7 478 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 PHF7Q9BWX1 381 aaPredicted RBP10.35□□□□□ -0.75
USHBP1-201ENST00000252597 GLRX2Q9NS18 164 aa10.35□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF816-ZNF321PA0A0X1KG74 233 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 TUSC2O75896 110 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 DEFA4P12838 97 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 HNF1AP20823 631 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 LTC4SQ16873 150 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 RSPO1Q2MKA7 263 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF600Q6ZNG1 722 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF818PQ6ZRF7 136 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 DMBX1Q8NFW5 382 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 TVP23CQ96ET8 276 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 HIST1H2AAQ96QV6 131 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 C19orf25Q9UFG5 118 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-201ENST00000252597 STRAPQ9Y3F4 350 aaKnown RBP10.34□□□□□ -0.75
USHBP1-201ENST00000252597 C5orf49A4QMS7 147 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 MMP7P09237 267 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-201ENST00000252597 BCL3P20749 454 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 CD200P41217 278 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 COL19A1Q14993 1142 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 CYB5R2Q6BCY4 276 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 SYT13Q7L8C5 426 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 SDSLQ96GA7 329 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 BOD1Q96IK1 185 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 FAM210BQ96KR6 192 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 SRXN1Q9BYN0 137 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 PLEKHF2Q9H8W4 249 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 EML6Q6ZMW3 1958 aa10.34□□□□□ -0.75
USHBP1-201ENST00000252597 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
USHBP1-201ENST00000252597 ZFHX2Q9C0A1 2572 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 IGKV1D-13A0A0B4J2D9 117 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 A0A1W2PPQ1 181 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 IGKV1-13P0DP09 117 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 CCL4P13236 92 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 MSX1P28360 303 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF787Q6DD87 383 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 NFAM1Q8NET5 270 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 CCDC74BQ96LY2 380 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 ERRFI1Q9UJM3 462 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 LAMP3Q9UQV4 416 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 HDGFL3Q9Y3E1 203 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 PDCD6O75340 191 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SOD3P08294 240 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 CD63P08962 238 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 TRGC1P0CF51 173 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 FUT3P21217 361 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms