RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 FAM221AA4D161 298 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 TRDCB7Z8K6 153 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
SDF2-201ENST00000247020 WNT9BO14905 357 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 GNLYP22749 145 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 GRNP28799 593 aaKnown RBP11.95□□□□□ -0.5
SDF2-201ENST00000247020 SEC61A1P61619 476 aaKnown RBP11.95□□□□□ -0.5
SDF2-201ENST00000247020 DHODHQ02127 395 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 TLE1Q04724 770 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 CDSNQ15517 529 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 MOGAT3Q86VF5 341 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 OR4A4PQ8NGN8 299 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 MARCH1Q8TCQ1 289 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 FAM222BQ8WU58 562 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 ASB13Q8WXK3 278 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
SDF2-201ENST00000247020 TMEM204Q9BSN7 226 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 EGLN1Q9GZT9 426 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 WDR13Q9H1Z4 485 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 MS4A5Q9H3V2 200 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 GCM1Q9NP62 436 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 RNF7Q9UBF6 113 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 WIPI2Q9Y4P8 454 aa11.95□□□□□ -0.5
SDF2-201ENST00000247020 MEIKINA0A087WXM9 373 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 IGHV3-64DA0A0J9YX35 117 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 FABP7O15540 132 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 ANXA3P12429 323 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 UCP3P55916 312 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 HLA-DRB3P79483 266 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 CD83Q01151 205 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 TMEM128Q5BJH2 165 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 SLC35E4Q6ICL7 350 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 TMED4Q7Z7H5 227 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 LYG2Q86SG7 212 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 OR11H7Q8NGC8 314 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 PPP1R35Q8TAP8 253 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 ZFAND1Q8TCF1 268 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 RANGRFQ9HD47 186 aaPredicted RBP11.94□□□□□ -0.5
SDF2-201ENST00000247020 OR14J1Q9UGF5 321 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 PCDHB10Q9UN67 800 aa11.94□□□□□ -0.5
SDF2-201ENST00000247020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 HSPB6O14558 160 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 CTSDP07339 412 aaPredicted RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 GSTT2P0CG29 244 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 ZBTB25P24278 435 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 LOXP28300 417 aaPredicted RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 EIF2B2P49770 351 aaKnown RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 NPY4RP50391 375 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 DHRS2Q13268 280 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 LILRB1Q8NHL6 650 aaPredicted RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 PLPPR1Q8TBJ4 325 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 CAPSLQ8WWF8 208 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 ITLN2Q8WWU7 325 aaPredicted RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 CABLES2Q9BTV7 478 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 MBNL3Q9NUK0 354 aaKnown RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
SDF2-201ENST00000247020 DYSFO75923 2080 aa11.93□□□□□ -0.5
SDF2-201ENST00000247020 TMEM30CPA0ZSE6 113 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 RFPL4AA6NLU0 287 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 LRRC30A6NM36 301 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 DEFB108AA8MXU0 73 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 NPIPB11E5RHQ5 1161 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 RFPL4AL1F8VTS6 287 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 HLA-AP01891 365 aaKnown RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 TK1P04183 234 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 PSG2P11465 335 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 IRF2P14316 349 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 EGR1P18146 543 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 UQCRFS1P47985 274 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 GMFBP60983 142 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 ZNF672Q499Z4 452 aaPredicted RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 MUC20Q8N307 709 aaPredicted RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 MOB3AQ96BX8 217 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 ZNF486Q96H40 463 aaPredicted RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 FYTTD1Q96QD9 318 aaKnown RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 CISD1Q9NZ45 108 aaKnown RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 COL6A6A6NMZ7 2263 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 ACACBO00763 2458 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 SIAH2O43255 324 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 C1QBP02746 253 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 MUC1P15941 1255 aaPredicted RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 FCGR2CP31995 323 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 PRDX2P32119 198 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 IL13RA1P78552 427 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 COL10A1Q03692 680 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 ZFP69Q49AA0 526 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 C11orf88Q6PI97 169 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 C20orf204Q6ZNR8 217 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 C12orf45Q8N5I9 185 aaPredicted RBP11.92□□□□□ -0.5
SDF2-201ENST00000247020 OR2AK2Q8NG84 335 aa11.92□□□□□ -0.5
SDF2-201ENST00000247020 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms