RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 IL13RA2Q14627 380 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 ZNF718Q3SXZ3 478 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 CLEC18BQ6UXF7 455 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 Q6ZS49 121 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 KCTD9Q7L273 389 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 FAM58AQ8N1B3 248 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 SHPKQ9UHJ6 478 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 RFPL4AA6NLU0 287 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 RFPL4AL1F8VTS6 287 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 NAPSAO96009 420 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 GLRXP35754 106 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 FABP6P51161 128 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 MBNL2Q5VZF2 373 aaKnown RBP19.16■□□□□ 0.66
CDX1-201ENST00000231656 RGS7BPQ6MZT1 257 aaPredicted RBP19.16■□□□□ 0.66
CDX1-201ENST00000231656 TEX261Q6UWH6 196 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 OR8H1Q8NGG4 311 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 DHRS9Q9BPW9 319 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 RHOFQ9HBH0 211 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 FZR1Q9UM11 496 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 C14orf166Q9Y224 244 aaKnown RBP19.16■□□□□ 0.66
CDX1-201ENST00000231656 U3KQ87 197 aa19.16■□□□□ 0.66
CDX1-201ENST00000231656 TUBAL3A6NHL2 446 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 CTSDP07339 412 aaPredicted RBP19.15■□□□□ 0.66
CDX1-201ENST00000231656 DUSP1P28562 367 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 GCH1P30793 250 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 SLC9A3R2Q15599 337 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 SRSF7Q16629 238 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDX1-201ENST00000231656 SCCPDHQ8NBX0 429 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 FAM210AQ96ND0 272 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 FXYD6Q9H0Q3 95 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 PURGQ9UJV8 347 aaKnown RBP19.15■□□□□ 0.66
CDX1-201ENST00000231656 ROS1P08922 2347 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 ICE1Q9Y2F5 2266 aa19.15■□□□□ 0.66
CDX1-201ENST00000231656 FXYD6-FXYD2A0A087WZ82 144 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 L7N2F9 121 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 GMFBP60983 142 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 OPCMLQ14982 345 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 MSMPQ1L6U9 139 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 WDR13Q9H1Z4 485 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 SPACA1Q9HBV2 294 aa19.14■□□□□ 0.66
CDX1-201ENST00000231656 CHMP1AQ9HD42 196 aaPredicted RBP19.14■□□□□ 0.66
CDX1-201ENST00000231656 C3orf80F5H4A9 247 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 ARPC5O15511 151 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 ANKRD55Q3KP44 614 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 NCMAPQ5T1S8 102 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 ZNF680Q8NEM1 530 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 TMEM171Q8WVE6 324 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 SEC22AQ96IW7 307 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 PDCD10Q9BUL8 212 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 DPCDQ9BVM2 203 aaPredicted RBP19.14■□□□□ 0.65
CDX1-201ENST00000231656 CLEC4MQ9H2X3 399 aaPredicted RBP19.14■□□□□ 0.65
CDX1-201ENST00000231656 ESRP2Q9H6T0 727 aaKnown RBP19.14■□□□□ 0.65
CDX1-201ENST00000231656 IFT22Q9H7X7 185 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 Q9N2K0 584 aa19.14■□□□□ 0.65
CDX1-201ENST00000231656 H0YL77 283 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 M0R233 179 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 NOS1APO75052 506 aaPredicted RBP19.13■□□□□ 0.65
CDX1-201ENST00000231656 ZNF250P15622 560 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 C4BPBP20851 252 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 KITLGP21583 273 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 ERVK11-1P61568 191 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 FGL1Q08830 312 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 ZNF154Q13106 437 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 OR8G1Q15617 311 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 SUMF2Q8NBJ7 301 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 NUP37Q8NFH4 326 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 OR8G5Q8NG78 346 aa19.13■□□□□ 0.65
CDX1-201ENST00000231656 TRAV24A0A0B4J272 114 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 TMEM210A6NLX4 147 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 ZNF205O95201 554 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 HTR2BP41595 481 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 RPS23P62266 143 aaKnown RBP19.12■□□□□ 0.65
CDX1-201ENST00000231656 VHLLQ6RSH7 139 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 COQ8AQ8NI60 647 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 GTF3AQ92664 365 aaKnown RBP19.12■□□□□ 0.65
CDX1-201ENST00000231656 PLPPR2Q96GM1 343 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 TMEM100Q9NV29 134 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 PRR13Q9NZ81 148 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 POLDIP2Q9Y2S7 368 aa19.12■□□□□ 0.65
CDX1-201ENST00000231656 USP9XQ93008 2570 aaPredicted RBP19.12■□□□□ 0.65
CDX1-201ENST00000231656 FAM25EA8MYX2 175 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 MLNRO43193 412 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 KNG1P01042 644 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 GLAP06280 429 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 FCGR2CP31995 323 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 SERPINF1P36955 418 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 Q6P435 159 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 Q8IYB0 196 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 NRIP2Q9BQI9 281 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 RAB18Q9NP72 206 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.11■□□□□ 0.65
CDX1-201ENST00000231656 HSPB6O14558 160 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 TIMM8AO60220 97 aaPredicted RBP19.11■□□□□ 0.65
CDX1-201ENST00000231656 PGA5P0DJD9 388 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 RPA2P15927 270 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 ADAM5Q6NVV9 412 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 TMEM65Q6PI78 240 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 LRP11Q86VZ4 500 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 DUSP13Q9UII6 198 aa19.11■□□□□ 0.65
CDX1-201ENST00000231656 CRYM-AS1A6NIL9 109 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms