RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CHST5Q9GZS9 411 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 OPN4Q9UHM6 478 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 ZNF107Q9UII5 783 aaPredicted RBP10.1□□□□□ -0.79
NOD1-201ENST00000222823 TIMM9Q9Y5J7 89 aa10.1□□□□□ -0.79
NOD1-201ENST00000222823 TRDCB7Z8K6 153 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 PPYP01298 95 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 HLA-DQB1P01920 261 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 OPRK1P41145 380 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 ERVFC1-1P60608 527 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 ZNF586Q9NXT0 402 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 ONECUT1Q9UBC0 465 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 STARD10Q9Y365 291 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 B4E171 279 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 S100A8P05109 93 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 FGF2P09038 288 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 SPP1P10451 314 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 RPS4Y1P22090 263 aaKnown RBP10.09□□□□□ -0.79
NOD1-201ENST00000222823 TSPAN7P41732 249 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 FAM3AP98173 230 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 FOXO1Q12778 655 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 SEZ6L2Q6UXD5 910 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 FAM122AQ96E09 287 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 AICDAQ9GZX7 198 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 MED19A0JLT2 244 aaPredicted RBP10.09□□□□□ -0.79
NOD1-201ENST00000222823 ZNF205O95201 554 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 MPV17LQ2QL34 196 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 FBXW9Q5XUX1 488 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 SLC25A45Q8N413 288 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 OR5A2Q8NGI9 324 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 TMEM18Q96B42 140 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 NEIL1Q96FI4 390 aaPredicted RBP10.09□□□□□ -0.79
NOD1-201ENST00000222823 FRMPD3Q5JV73 1810 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 KLF4O43474 513 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 SYNGR2O43760 224 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 TTRP02766 147 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 ZP3P21754 424 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 MRPS11P82912 194 aaKnown RBP10.09□□□□□ -0.79
NOD1-201ENST00000222823 TBC1D26Q86UD7 250 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 SLC35B3Q9H1N7 401 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 PRR13Q9NZ81 148 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 MMP24Q9Y5R2 645 aa10.09□□□□□ -0.79
NOD1-201ENST00000222823 ATRXP46100 2492 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 SERTM2A0A1B0GWG4 89 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 LANCL1O43813 399 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 TSPAN2O60636 221 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 GZMHP20718 246 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 COX7A1P24310 79 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 EFNB2P52799 333 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 KLF9Q13886 244 aaPredicted RBP10.08□□□□□ -0.8
NOD1-201ENST00000222823 HIKESHIQ53FT3 197 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 SIGLECL1Q8N7X8 197 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 CLCF1Q9UBD9 225 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 TRAV38-1A0A0B4J264 116 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 RBP4P02753 201 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 OPN1MWP04001 364 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 CD1AP06126 327 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 SP1P08047 785 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 ZP4Q12836 540 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 INPP5JQ15735 1006 aaPredicted RBP10.08□□□□□ -0.8
NOD1-201ENST00000222823 FAM27BQ5VT28 67 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 SLC25A42Q86VD7 318 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 ADTRPQ96IZ2 230 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 SLC2A9Q9NRM0 540 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 KLHDC2Q9Y2U9 406 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 AMDHD2Q9Y303 409 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 PRSS44E7EML9 344 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 CLDN34H7C241 214 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 CD3EP07766 207 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 IFITM2Q01629 132 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 PAX5Q02548 391 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 IL24Q13007 206 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 OR5I1Q13606 314 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 GGTLC2Q14390 218 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 BHLHA15Q7RTS1 189 aaPredicted RBP10.08□□□□□ -0.8
NOD1-201ENST00000222823 RAB1CQ92928 201 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 LURAP1Q96LR2 239 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 RAB33BQ9H082 229 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
NOD1-201ENST00000222823 PCDHGA9Q9Y5G4 932 aaKnown RBP10.08□□□□□ -0.8
NOD1-201ENST00000222823 GBF1Q92538 1859 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 ABCA7Q8IZY2 2146 aa10.08□□□□□ -0.8
NOD1-201ENST00000222823 M0QZ24 198 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 TMPRSS2O15393 492 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 UPK3AO75631 287 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 FHL5Q5TD97 284 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 OR4S2Q8NH73 311 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 SCMH1Q96GD3 660 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 TRAF4Q9BUZ4 470 aaPredicted RBP10.07□□□□□ -0.8
NOD1-201ENST00000222823 GAR1Q9NY12 217 aaKnown RBP10.07□□□□□ -0.8
NOD1-201ENST00000222823 RNF24Q9Y225 148 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 A0A1W2PN81 502 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 HSBP1O75506 76 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 ADRA2AP08913 450 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 CHRNA7P36544 502 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 SPINK9Q5DT21 86 aa10.07□□□□□ -0.8
NOD1-201ENST00000222823 FAM162BQ5T6X4 162 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms