RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OR8I2Q8N0Y5 310 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 ZNF680Q8NEM1 530 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 CABIN1Q9Y6J0 2220 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 MESP2Q0VG99 397 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 SURF2Q15527 256 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-201ENST00000219334 ZNF596Q8TC21 504 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 FRRS1LQ9P0K9 344 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 PCDHGA9Q9Y5G4 932 aaKnown RBP16.6■□□□□ 0.25
SMPD3-201ENST00000219334 ZNF658BQ4V348 819 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-201ENST00000219334 RABAC1Q9UI14 185 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 OGG1O15527 345 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 GSTZ1O43708 216 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-201ENST00000219334 SLC6A1P30531 599 aa16.6■□□□□ 0.25
SMPD3-201ENST00000219334 RPL30P62888 115 aaKnown RBP16.6■□□□□ 0.25
SMPD3-201ENST00000219334 SYNGR2O43760 224 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 TPPP2P59282 170 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 SSX1Q16384 188 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 LINC00596Q86U02 117 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 ADAMTS17Q8TE56 1095 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 DTX4Q9Y2E6 619 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 ADRA2AP08913 450 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 FOXL2P58012 376 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 RPS4XP62701 263 aaKnown RBP16.59■□□□□ 0.25
SMPD3-201ENST00000219334 GUK1Q16774 197 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 RBPMS2Q6ZRY4 209 aaKnown RBP16.59■□□□□ 0.25
SMPD3-201ENST00000219334 TECRQ9NZ01 308 aaKnown RBP16.59■□□□□ 0.25
SMPD3-201ENST00000219334 CPN1P15169 458 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 HTN1P15515 57 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 NQO2P16083 231 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 LSM11P83369 360 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMPD3-201ENST00000219334 TGIF1Q15583 401 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 RNASEK-C17orf49H0YIS7 233 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 SOCS1O15524 211 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 RPS4Y1P22090 263 aaKnown RBP16.59■□□□□ 0.25
SMPD3-201ENST00000219334 ANGPTL4Q9BY76 406 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 CISD1Q9NZ45 108 aaKnown RBP16.59■□□□□ 0.25
SMPD3-201ENST00000219334 WIPI2Q9Y4P8 454 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 LIPGQ9Y5X9 500 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 WSB1Q9Y6I7 421 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 ASXL3Q9C0F0 2248 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 CELA2AP08217 269 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 HLA-DRB3P79483 266 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 IL24Q13007 206 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 SHISA5Q8N114 240 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 TMEM167BQ9NRX6 74 aa16.59■□□□□ 0.25
SMPD3-201ENST00000219334 CTSSP25774 331 aa16.58■□□□□ 0.25
SMPD3-201ENST00000219334 SPCS3P61009 180 aa16.58■□□□□ 0.25
SMPD3-201ENST00000219334 RNF122Q9H9V4 155 aa16.58■□□□□ 0.25
SMPD3-201ENST00000219334 OR2T8A6NH00 312 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 NTN1O95631 604 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 FHL5Q5TD97 284 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 OR4D11Q8NGI4 311 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 DNASE2BQ8WZ79 361 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 SLC7A10Q9NS82 523 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 UPK3AO75631 287 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 NGFRP08138 427 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 SUMO1P63165 101 aaKnown RBP16.58■□□□□ 0.24
SMPD3-201ENST00000219334 SLC23A3Q6PIS1 610 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 C19orf35Q6ZS72 473 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 ZBTB34Q8NCN2 500 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 C2CD4CQ8TF44 421 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 WDFY2Q96P53 400 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 CHST5Q9GZS9 411 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 PRDM6Q9NQX0 595 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 DTD1Q8TEA8 209 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 CHODLQ9H9P2 273 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 VSIG4Q9Y279 399 aa16.58■□□□□ 0.24
SMPD3-201ENST00000219334 C19orf48Q6RUI8 117 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 NFAM1Q8NET5 270 aaPredicted RBP16.57■□□□□ 0.24
SMPD3-201ENST00000219334 ASCL3Q9NQ33 180 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 HTR1DP28221 377 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 PRDX2P32119 198 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 RAG2P55895 527 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 KRTDAPP60985 99 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 POLR2GP62487 172 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMPD3-201ENST00000219334 TIAL1Q01085 375 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMPD3-201ENST00000219334 FAM27BQ5VT28 67 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 FAM219AQ8IW50 185 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 SLC26A10Q8NG04 563 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 ZCCHC14Q8WYQ9 949 aaKnown RBP16.57■□□□□ 0.24
SMPD3-201ENST00000219334 MMP24Q9Y5R2 645 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 CDK2AP1O14519 115 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF737O75373 536 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 UCP2P55851 309 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 AESQ08117 197 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 GAPTQ8N292 157 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 OR1L8Q8NGR8 309 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 WNT2BQ93097 391 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 SLIRPQ9GZT3 109 aaKnown RBP16.57■□□□□ 0.24
SMPD3-201ENST00000219334 SYNGR1O43759 233 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 PPYP01298 95 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 VDAC1P21796 283 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 TMEM241Q24JQ0 296 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 NAT8BQ9UHF3 227 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 NEU3Q9UQ49 428 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 ZNF831Q5JPB2 1677 aa16.57■□□□□ 0.24
SMPD3-201ENST00000219334 NPIPB8E9PQR5 432 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 ARG1P05089 322 aa16.56■□□□□ 0.24
SMPD3-201ENST00000219334 PRSS54Q6PEW0 395 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms