RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TIMP4Q99727 224 aa10.47□□□□□ -0.73
CHPF2-201ENST00000035307 RTL8AQ9BWD3 113 aa10.47□□□□□ -0.73
CHPF2-201ENST00000035307 MSL2Q9HCI7 577 aa10.47□□□□□ -0.73
CHPF2-201ENST00000035307 SLC39A9Q9NUM3 307 aa10.47□□□□□ -0.73
CHPF2-201ENST00000035307 MMP24Q9Y5R2 645 aa10.47□□□□□ -0.73
CHPF2-201ENST00000035307 BOD1L1Q8NFC6 3051 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 MPTX1A8MV57 137 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 GPR137BO60478 399 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 JTBO76095 146 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 NGFP01138 241 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 PNLIPRP3Q17RR3 467 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 RPUSD3Q6P087 351 aaKnown RBP10.46□□□□□ -0.73
CHPF2-201ENST00000035307 SLC25A42Q86VD7 318 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 MITD1Q8WV92 249 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 KIF25Q9UIL4 384 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 STARD10Q9Y365 291 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 SETD2Q9BYW2 2564 aaPredicted RBP10.46□□□□□ -0.73
CHPF2-201ENST00000035307 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
CHPF2-201ENST00000035307 PTGDSP41222 190 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 SSTP61278 116 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 SSBP1Q04837 148 aaKnown RBP10.46□□□□□ -0.73
CHPF2-201ENST00000035307 ADIRFQ15847 76 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 PDLIM3Q53GG5 364 aaPredicted RBP10.46□□□□□ -0.73
CHPF2-201ENST00000035307 PLA2G2CQ5R387 149 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 OR2A2Q6IF42 318 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 ZNF573Q86YE8 665 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 TMEM38BQ9NVV0 291 aa10.46□□□□□ -0.73
CHPF2-201ENST00000035307 LOC102723996A0A087X1L8 192 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 C5orf63A6NC05 138 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 OPN1MWP04001 364 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 OPN1MW2P0DN77 364 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 OPN1MW3P0DN78 364 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 OR13G1Q8NGZ3 307 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 HPSE2Q8WWQ2 592 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 FBXO17Q96EF6 278 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 DYNLRB1Q9NP97 96 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 B3GAT1Q9P2W7 334 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 LRRK2Q5S007 2527 aa10.46□□□□□ -0.74
CHPF2-201ENST00000035307 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 E5RGE8 158 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF660Q6AZW8 331 aaPredicted RBP10.45□□□□□ -0.74
CHPF2-201ENST00000035307 WDFY1Q8IWB7 410 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 OR2Z1Q8NG97 314 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
CHPF2-201ENST00000035307 OR5B12Q96R08 314 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 PLEKHF2Q9H8W4 249 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 SEMA5BQ9P283 1151 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 CENPEQ02224 2701 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 LRRC3CA6NJW4 275 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 WISP2O76076 250 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 NPBWR2P48146 333 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 LSM6P62312 80 aaKnown RBP10.45□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF266Q14584 549 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 RNFT1Q5M7Z0 435 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 FAM185AQ8N0U4 392 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 PPP1R35Q8TAP8 253 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 PRR7Q8TB68 274 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 RPS4Y2Q8TD47 263 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 SSX3Q99909 188 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 SLC2A9Q9NRM0 540 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 GHRLQ9UBU3 117 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 ENSAO43768 121 aaKnown RBP10.45□□□□□ -0.74
CHPF2-201ENST00000035307 BTNL3Q6UXE8 466 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 CHST5Q9GZS9 411 aa10.45□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF703Q9H7S9 590 aaPredicted RBP10.45□□□□□ -0.74
CHPF2-201ENST00000035307 VSTM5A8MXK1 200 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 IFNA1P01562 189 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 CATR1Q13166 79 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 FAM58AQ8N1B3 248 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 OR1K1Q8NGR3 316 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 OR10C1Q96KK4 312 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 PLEKHA3Q9HB20 300 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 HMSDA8MTL9 139 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 SFTA3P0C7M3 94 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 ARR3P36575 388 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 TNFSF10P50591 281 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 FGF8P55075 233 aaPredicted RBP10.44□□□□□ -0.74
CHPF2-201ENST00000035307 GNG3P63215 75 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 VWA1Q6PCB0 445 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 SLC25A47Q6Q0C1 308 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 GAPTQ8N292 157 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 SCCPDHQ8NBX0 429 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 MRGPRDQ8TDS7 321 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 ARG1P05089 322 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 NDUFA6P56556 154 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 ANKRD55Q3KP44 614 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 PLAC9Q5JTB6 97 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 AVPI1Q5T686 147 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 PRAMEF5Q5TYX0 476 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 PRAMEF6Q5VXH4 476 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 FGFBP3Q8TAT2 258 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 SOSTQ9BQB4 213 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 NAA60Q9H7X0 242 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms