RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 DCAF5Q96JK2 942 aa9.27□□□□□ -0.93
RTTN-223ENST00000640931 TMX4Q9H1E5 349 aaPredicted RBP9.27□□□□□ -0.93
RTTN-223ENST00000640931 RANBP17Q9H2T7 1088 aaKnown RBP9.27□□□□□ -0.93
RTTN-223ENST00000640931 PSD3Q9NYI0 1048 aa9.27□□□□□ -0.93
RTTN-223ENST00000640931 CPSF2Q9P2I0 782 aaKnown RBP9.27□□□□□ -0.93
RTTN-223ENST00000640931 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
RTTN-223ENST00000640931 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 HMMRO75330 724 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 CDC45O75419 566 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 ADAMTS2O95450 1211 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 CCDC26Q8TAB7 109 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 IL25Q9H293 177 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 A1CFQ9NQ94 594 aaKnown RBP9.26□□□□□ -0.93
RTTN-223ENST00000640931 DDX21Q9NR30 783 aaKnown RBP eCLIP9.26□□□□□ -0.93
RTTN-223ENST00000640931 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
RTTN-223ENST00000640931 FAM163BP0C2L3 166 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 IL2RBP14784 551 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 ZRSR1Q15695 479 aaKnown RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 TTLL7Q6ZT98 887 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 TRIM74Q86UV6 250 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 TRIM73Q86UV7 250 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 TTC5Q8N0Z6 440 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 PROCA1Q8NCQ7 364 aaPredicted RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 SSH3Q8TE77 659 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 BICC1Q9H694 974 aaKnown RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 VEZTQ9HBM0 779 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 C9orf78Q9NZ63 289 aaPredicted RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 BAG4O95429 457 aaKnown RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 CDC37Q16543 378 aaPredicted RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 EFCAB13Q8IY85 973 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 TEX11Q8IYF3 940 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 GIMAP7Q8NHV1 300 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 AK7Q96M32 723 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
RTTN-223ENST00000640931 MAF1Q9H063 256 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 SIL1Q9H173 461 aa9.25□□□□□ -0.93
RTTN-223ENST00000640931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.25□□□□□ -0.932e-6■□□□□ 11.1
RTTN-223ENST00000640931 PXDNLA1KZ92 1463 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
RTTN-223ENST00000640931 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
RTTN-223ENST00000640931 NEBLO76041 1014 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 GRIK3Q13003 919 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 TTLL5Q6EMB2 1281 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 LEKR1Q6ZMV7 388 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
RTTN-223ENST00000640931 RILPL2Q969X0 211 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 ST7Q9NRC1 585 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 HYPKQ9NX55 129 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 TBC1D2BQ9UPU7 963 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
RTTN-223ENST00000640931 PKD1L3Q7Z443 1732 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 GLI3P10071 1580 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 SNRPA1P09661 255 aaKnown RBP9.24□□□□□ -0.93
RTTN-223ENST00000640931 SKILP12757 684 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 CORO7P57737 925 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 ACRBPQ8NEB7 543 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 CCDC112Q8NEF3 446 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 RHPN1Q8TCX5 695 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 FMNL2Q96PY5 1086 aa9.24□□□□□ -0.93
RTTN-223ENST00000640931 CHCHD3Q9NX63 227 aaKnown RBP9.24□□□□□ -0.93
RTTN-223ENST00000640931 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
RTTN-223ENST00000640931 KIF2AO00139 706 aaPredicted RBP9.23□□□□□ -0.93
RTTN-223ENST00000640931 MX1P20591 662 aa9.23□□□□□ -0.93
RTTN-223ENST00000640931 RBBP5Q15291 538 aaKnown RBP9.23□□□□□ -0.93
RTTN-223ENST00000640931 SLC5A9Q2M3M2 681 aa9.23□□□□□ -0.93
RTTN-223ENST00000640931 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
RTTN-223ENST00000640931 GNL3LQ9NVN8 582 aaKnown RBP9.23□□□□□ -0.93
RTTN-223ENST00000640931 ZNF232Q9UNY5 417 aa9.23□□□□□ -0.93
RTTN-223ENST00000640931 PCDH11XQ9BZA7 1347 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 PCDH11YQ9BZA8 1340 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 A0A0G2JS52 829 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 EIF3CLB5ME19 914 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 GRM8O00222 908 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 MYBL2P10244 700 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 EIF3CQ99613 913 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 MMTAG2Q9BU76 263 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 ZBTB3Q9H5J0 574 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 SPATS2LQ9NUQ6 558 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 NHSL1Q5SYE7 1610 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 MRC1P22897 1456 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 SHANK3Q9BYB0 1731 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 GCFC2P16383 781 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 RPS6KA3P51812 740 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 TBC1D8BQ0IIM8 1120 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 CRYMQ14894 314 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 RPUSD2Q8IZ73 545 aaKnown RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 DRAXINQ8NBI3 349 aaPredicted RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 PIGBQ92521 554 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 ZNF396Q96N95 335 aaPredicted RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 METTL22Q9BUU2 404 aaPredicted RBP9.22□□□□□ -0.93
RTTN-223ENST00000640931 USP26Q9BXU7 913 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 LMBRD1Q9NUN5 540 aa9.22□□□□□ -0.93
RTTN-223ENST00000640931 ROBO1Q9Y6N7 1651 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms