RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 MYOZ2Q9NPC6 264 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 KIAA0100Q14667 2235 aaKnown RBP7.07□□□□□ -1.28
PDE4D-229ENST00000638939 USP17L3A6NCW0 530 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 USP17L4A6NCW7 530 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 G3V3G9 751 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 USP17L8P0C7I0 530 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 ATP2B4P23634 1241 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 NOM1Q5C9Z4 860 aaKnown RBP7.07□□□□□ -1.28
PDE4D-229ENST00000638939 RBM26Q5T8P6 1007 aaKnown RBP7.07□□□□□ -1.28
PDE4D-229ENST00000638939 CCDC30Q5VVM6 783 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 USP17L1Q7RTZ2 530 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 PRKRIP1Q9H875 184 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-229ENST00000638939 BSDC1Q9NW68 430 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-229ENST00000638939 RNF186Q9NXI6 227 aa7.07□□□□□ -1.28
PDE4D-229ENST00000638939 IGKV5-2P06315 115 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 DDX10Q13206 875 aaKnown RBP7.06□□□□□ -1.28
PDE4D-229ENST00000638939 SCARF1Q14162 830 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 CTU1Q7Z7A3 348 aaKnown RBP7.06□□□□□ -1.28
PDE4D-229ENST00000638939 C8orf58Q8NAV2 365 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 CSRNP1Q96S65 589 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 MAP3K2Q9Y2U5 619 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 SSC5DA1L4H1 1573 aa7.06□□□□□ -1.28
PDE4D-229ENST00000638939 NEURL1BA8MQ27 555 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 APAF1O14727 1248 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 TRPA1O75762 1119 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 CCT4P50991 539 aaKnown RBP7.05□□□□□ -1.28
PDE4D-229ENST00000638939 NEXNQ0ZGT2 675 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 PKN2Q16513 984 aaKnown RBP7.05□□□□□ -1.28
PDE4D-229ENST00000638939 STRIP1Q5VSL9 837 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 KSR2Q6VAB6 950 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 CHRDL2Q6WN34 429 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 APOBEC3FQ8IUX4 373 aaKnown RBP7.05□□□□□ -1.28
PDE4D-229ENST00000638939 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 TTLL11Q8NHH1 800 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 PLA2G12BQ9BX93 195 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 CFHR5Q9BXR6 569 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 COA1Q9GZY4 146 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 GREM2Q9H772 168 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 MINPP1Q9UNW1 487 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 DOCK2Q92608 1830 aa7.05□□□□□ -1.28
PDE4D-229ENST00000638939 MGAMO43451 1857 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 IL16Q14005 1332 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 CEP290O15078 2479 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 PTPRFP10586 1907 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 PI4KAP2A4QPH2 592 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 ELL2O00472 640 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-229ENST00000638939 WNT10BO00744 389 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 NF2P35240 595 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 SREBF2Q12772 1141 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 CCDC27Q2M243 656 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 PPP1R15BQ5SWA1 713 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 UBE3BQ7Z3V4 1068 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 PI4KAP1Q8N8J0 262 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-229ENST00000638939 STK31Q9BXU1 1019 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 LEMD3Q9Y2U8 911 aa7.04□□□□□ -1.28
PDE4D-229ENST00000638939 ZNF804BA4D1E1 1349 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 IRS2Q9Y4H2 1338 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 AK9Q5TCS8 1911 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 H7C1W4 665 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 IGHMBP2P38935 993 aaKnown RBP7.03□□□□□ -1.28
PDE4D-229ENST00000638939 TM4SF4P48230 202 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 SOX10P56693 466 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 CWF19L2Q2TBE0 894 aaKnown RBP7.03□□□□□ -1.28
PDE4D-229ENST00000638939 NBPF9Q3BBW0 867 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 TSPYL6Q8N831 410 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 ZBED3Q96IU2 234 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-229ENST00000638939 TMEM106CQ9BVX2 250 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 ANKRD2Q9GZV1 360 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 HPS5Q9UPZ3 1129 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 PPP2R3BQ9Y5P8 575 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 ZSWIM8A7E2V4 1837 aa7.03□□□□□ -1.28
PDE4D-229ENST00000638939 SASH1O94885 1247 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 ITGA6P23229 1130 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 CASP7P55210 303 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 FLIIQ13045 1269 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 GCKRQ14397 625 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 TWISTNBQ3B726 338 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 C15orf52Q6ZUT6 534 aaKnown RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 MOB2Q70IA6 237 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 TXNRD3Q86VQ6 643 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 MTMR14Q8NCE2 650 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 ZNF296Q8WUU4 475 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 JARID2Q92833 1246 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 TSR2Q969E8 191 aaKnown RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 MYH16Q9H6N6 1097 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 GPHNQ9NQX3 736 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 HDAC9Q9UKV0 1011 aa7.02□□□□□ -1.29
PDE4D-229ENST00000638939 RANBP2P49792 3224 aaKnown RBP7.02□□□□□ -1.29
PDE4D-229ENST00000638939 WTIPA6NIX2 430 aaPredicted RBP7.01□□□□□ -1.29
PDE4D-229ENST00000638939 UNCXA6NJT0 531 aa7.01□□□□□ -1.29
PDE4D-229ENST00000638939 UBE2Q2LH0YL09 131 aa7.01□□□□□ -1.29
PDE4D-229ENST00000638939 GPR25O00155 361 aa7.01□□□□□ -1.29
PDE4D-229ENST00000638939 ALDH1A1P00352 501 aa7.01□□□□□ -1.29
PDE4D-229ENST00000638939 CSF1RP07333 972 aa7.01□□□□□ -1.29
PDE4D-229ENST00000638939 ZBTB48P10074 688 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms