RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 RABL6Q3YEC7 729 aaPredicted RBP22.49■■□□□ 1.19
PNKP-225ENST00000636214 METTL24Q5JXM2 366 aa22.49■■□□□ 1.19
PNKP-225ENST00000636214 KAZALD1Q96I82 304 aa22.49■■□□□ 1.19
PNKP-225ENST00000636214 SLC10A3P09131 477 aa22.48■■□□□ 1.19
PNKP-225ENST00000636214 HIBADHP31937 336 aaKnown RBP22.48■■□□□ 1.19
PNKP-225ENST00000636214 PUS3Q9BZE2 481 aaKnown RBP22.48■■□□□ 1.19
PNKP-225ENST00000636214 JAG2Q9Y219 1238 aa22.48■■□□□ 1.19
PNKP-225ENST00000636214 RBM5P52756 815 aaKnown RBP eCLIP22.47■■□□□ 1.19
PNKP-225ENST00000636214 KIF23Q02241 960 aaPredicted RBP22.47■■□□□ 1.19
PNKP-225ENST00000636214 PRAMEF18Q5VWM3 479 aa22.47■■□□□ 1.19
PNKP-225ENST00000636214 FAM155AB1AL88 458 aaPredicted RBP22.46■■□□□ 1.19
PNKP-225ENST00000636214 FRAT2O75474 233 aaPredicted RBP22.46■■□□□ 1.19
PNKP-225ENST00000636214 GYG1P46976 350 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 CAVIN4Q5BKX8 364 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 CERS5Q8N5B7 392 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 ANKRD44Q8N8A2 993 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 ZIC5Q96T25 663 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 API5Q9BZZ5 524 aaKnown RBP22.46■■□□□ 1.19
PNKP-225ENST00000636214 USP44Q9H0E7 712 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 HDAC5Q9UQL6 1122 aa22.46■■□□□ 1.19
PNKP-225ENST00000636214 AKAP11Q9UKA4 1901 aa22.45■■□□□ 1.18
PNKP-225ENST00000636214 CFAP100Q494V2 611 aa22.45■■□□□ 1.18
PNKP-225ENST00000636214 ARMC9Q7Z3E5 817 aa22.45■■□□□ 1.18
PNKP-225ENST00000636214 REM2Q8IYK8 340 aaPredicted RBP22.45■■□□□ 1.18
PNKP-225ENST00000636214 RIPOR2Q9Y4F9 1068 aa22.45■■□□□ 1.18
PNKP-225ENST00000636214 COL1A1P02452 1464 aaPredicted RBP22.44■■□□□ 1.18
PNKP-225ENST00000636214 UBTFL1P0CB47 393 aaPredicted RBP22.44■■□□□ 1.18
PNKP-225ENST00000636214 MFSD14BQ5SR56 506 aa22.44■■□□□ 1.18
PNKP-225ENST00000636214 TRMT2AQ8IZ69 625 aaKnown RBP22.44■■□□□ 1.18
PNKP-225ENST00000636214 ZBED3Q96IU2 234 aaPredicted RBP22.44■■□□□ 1.18
PNKP-225ENST00000636214 CASP8AP2Q9UKL3 1982 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 FAM205AQ6ZU69 1335 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 UBE2Q2LH0YL09 131 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 RASAL3Q86YV0 1011 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 MTMR14Q8NCE2 650 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 TDRD7Q8NHU6 1098 aaKnown RBP22.43■■□□□ 1.18
PNKP-225ENST00000636214 FAM84BQ96KN1 310 aaPredicted RBP22.43■■□□□ 1.18
PNKP-225ENST00000636214 VEZTQ9HBM0 779 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 NOB1Q9ULX3 412 aaKnown RBP22.43■■□□□ 1.18
PNKP-225ENST00000636214 ECM29Q5VYK3 1845 aa22.43■■□□□ 1.18
PNKP-225ENST00000636214 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
PNKP-225ENST00000636214 SAGE1Q9NXZ1 904 aa22.42■■□□□ 1.18
PNKP-225ENST00000636214 PPP2R3BQ9Y5P8 575 aa22.42■■□□□ 1.18
PNKP-225ENST00000636214 KIF16BQ96L93 1317 aa22.41■■□□□ 1.18
PNKP-225ENST00000636214 SPDYE2BA6NHP3 402 aa22.41■■□□□ 1.18
PNKP-225ENST00000636214 PDE8BO95263 885 aa22.41■■□□□ 1.18
PNKP-225ENST00000636214 IFIT1P09914 478 aaKnown RBP22.41■■□□□ 1.18
PNKP-225ENST00000636214 SPDYE6P0CI01 402 aa22.41■■□□□ 1.18
PNKP-225ENST00000636214 PRKG1Q13976 671 aa22.41■■□□□ 1.18
PNKP-225ENST00000636214 DEFB129Q9H1M3 183 aa22.41■■□□□ 1.18
PNKP-225ENST00000636214 TTF2Q9UNY4 1162 aaKnown RBP22.41■■□□□ 1.18
PNKP-225ENST00000636214 CLRN2A0PK11 232 aa22.4■■□□□ 1.18
PNKP-225ENST00000636214 CHAF1AQ13111 956 aaPredicted RBP22.4■■□□□ 1.18
PNKP-225ENST00000636214 KLHDC4Q8TBB5 520 aa22.4■■□□□ 1.18
PNKP-225ENST00000636214 TRPA1O75762 1119 aa22.39■■□□□ 1.17
PNKP-225ENST00000636214 TNFAIP1Q13829 316 aa22.39■■□□□ 1.17
PNKP-225ENST00000636214 PUM3Q15397 648 aaKnown RBP22.39■■□□□ 1.17
PNKP-225ENST00000636214 TBC1D22AQ8WUA7 517 aa22.39■■□□□ 1.17
PNKP-225ENST00000636214 ABHD8Q96I13 439 aa22.39■■□□□ 1.17
PNKP-225ENST00000636214 SERPINA10Q9UK55 444 aa22.39■■□□□ 1.17
PNKP-225ENST00000636214 ANGEL1Q9UNK9 670 aaKnown RBP22.39■■□□□ 1.17
PNKP-225ENST00000636214 ARAP2Q8WZ64 1704 aa22.38■■□□□ 1.17
PNKP-225ENST00000636214 PPP1R12BO60237 982 aaPredicted RBP22.38■■□□□ 1.17
PNKP-225ENST00000636214 SUPT20HL1Q3ZLR7 823 aa22.38■■□□□ 1.17
PNKP-225ENST00000636214 FBXO33Q7Z6M2 555 aa22.38■■□□□ 1.17
PNKP-225ENST00000636214 CSRNP1Q96S65 589 aa22.38■■□□□ 1.17
PNKP-225ENST00000636214 RNF186Q9NXI6 227 aa22.38■■□□□ 1.17
PNKP-225ENST00000636214 IQSEC3Q9UPP2 1182 aaPredicted RBP22.38■■□□□ 1.17
PNKP-225ENST00000636214 EYA2O00167 538 aa22.37■■□□□ 1.17
PNKP-225ENST00000636214 SLC5A1P13866 664 aa22.37■■□□□ 1.17
PNKP-225ENST00000636214 RARSP54136 660 aaKnown RBP22.37■■□□□ 1.17
PNKP-225ENST00000636214 PRMT6Q96LA8 375 aaPredicted RBP22.37■■□□□ 1.17
PNKP-225ENST00000636214 PCDHAC2Q9Y5I4 1007 aa22.37■■□□□ 1.17
PNKP-225ENST00000636214 VGLL2Q8N8G2 317 aa22.36■■□□□ 1.17
PNKP-225ENST00000636214 SREBF2Q12772 1141 aa22.35■■□□□ 1.17
PNKP-225ENST00000636214 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
PNKP-225ENST00000636214 IPO8O15397 1037 aaKnown RBP22.34■■□□□ 1.17
PNKP-225ENST00000636214 CRKP46108 304 aa22.34■■□□□ 1.17
PNKP-225ENST00000636214 IREB2P48200 963 aaKnown RBP22.34■■□□□ 1.17
PNKP-225ENST00000636214 BCAMP50895 628 aa22.34■■□□□ 1.17
PNKP-225ENST00000636214 PTPN12Q05209 780 aaKnown RBP22.34■■□□□ 1.17
PNKP-225ENST00000636214 MKRN3Q13064 507 aaKnown RBP22.34■■□□□ 1.17
PNKP-225ENST00000636214 DGKZQ13574 1117 aa22.34■■□□□ 1.17
PNKP-225ENST00000636214 LPIN2Q92539 896 aa22.34■■□□□ 1.17
PNKP-225ENST00000636214 SIL1Q9H173 461 aa22.34■■□□□ 1.17
PNKP-225ENST00000636214 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.34■■□□□ 1.17
PNKP-225ENST00000636214 LRRFIP2Q9Y608 721 aaKnown RBP22.34■■□□□ 1.17
PNKP-225ENST00000636214 MAST3O60307 1309 aa22.33■■□□□ 1.17
PNKP-225ENST00000636214 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.17
PNKP-225ENST00000636214 TNNI2P48788 182 aa22.33■■□□□ 1.17
PNKP-225ENST00000636214 DZIP1LQ8IYY4 767 aaKnown RBP22.33■■□□□ 1.17
PNKP-225ENST00000636214 ARHGAP45Q92619 1136 aa22.33■■□□□ 1.17
PNKP-225ENST00000636214 SLC10A4Q96EP9 437 aa22.33■■□□□ 1.17
PNKP-225ENST00000636214 MCOLN1Q9GZU1 580 aa22.33■■□□□ 1.17
PNKP-225ENST00000636214 CEP126Q9P2H0 1117 aa22.33■■□□□ 1.17
PNKP-225ENST00000636214 ZNF70Q9UC06 446 aaPredicted RBP22.33■■□□□ 1.17
PNKP-225ENST00000636214 MYH13Q9UKX3 1938 aa22.32■■□□□ 1.16
PNKP-225ENST00000636214 CCDC85CA6NKD9 419 aa22.32■■□□□ 1.16
PNKP-225ENST00000636214 GNAI3P08754 354 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms