RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 FERMT3Q86UX7 667 aa12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 NSUN7Q8NE18 718 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 PDLIM2Q96JY6 352 aa12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 GJD4Q96KN9 370 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 PUS7LQ9H0K6 701 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
SYNGAP1-209ENST00000635885 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 ELP1O95163 1332 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 ESPNB1AK53 854 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 GPAA1O43292 621 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 CTDNEP1O95476 244 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 FGAP02671 866 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 SLC5A1P13866 664 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 PHKA1P46020 1223 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 IMMTQ16891 758 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 UVSSAQ2YD98 709 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 FAM173BQ6P4H8 233 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 HELBQ8NG08 1087 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 LPIN2Q92539 896 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
SYNGAP1-209ENST00000635885 FAM177BA6PVY3 158 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 NTSR2O95665 410 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 PDIA3P30101 505 aaKnown RBP12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 CLCN1P35523 988 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 EVCP57679 992 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 HAND2P61296 217 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 UBE3CQ15386 1083 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 MB21D2Q8IYB1 491 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 FAM184AQ8NB25 1140 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 DDX11Q96FC9 970 aa12.21□□□□□ -0.45
SYNGAP1-209ENST00000635885 BTAF1O14981 1849 aa12.21□□□□□ -0.46
SYNGAP1-209ENST00000635885 SCN7AQ01118 1682 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 WDR19Q8NEZ3 1342 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 MYH13Q9UKX3 1938 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 TCRBV5S4A2TA0A5A2 114 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 PTPDC1A2A3K4 754 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 H3BQV1 296 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 PDE6AP16499 860 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 CCT2P78371 535 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 CCDC152Q4G0S7 254 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 IFFO2Q5TF58 517 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 NAA16Q6N069 864 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 FUCA2Q9BTY2 467 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 ZSCAN16Q9H4T2 348 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 SEC31BQ9NQW1 1179 aa12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-209ENST00000635885 ZNF532Q9HCE3 1301 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 ZNF213O14771 459 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 KCNQ2O43526 872 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 PRC1O43663 620 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 MCM5P33992 734 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 ANTXR2P58335 489 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 ALX1Q15699 326 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 NCOA7Q8NI08 942 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 WWC3Q9ULE0 1092 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 COL4A1P02462 1669 aa12.19□□□□□ -0.46
SYNGAP1-209ENST00000635885 SALL1Q9NSC2 1324 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 TIAM2Q8IVF5 1701 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 LIG1P18858 919 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 GIMAP6Q6P9H5 292 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 SPATA5Q8NB90 893 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
SYNGAP1-209ENST00000635885 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 HMGB2P26583 209 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 FOSBP53539 338 aa12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 STRBPQ96SI9 672 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 MYH6P13533 1939 aa12.17□□□□□ -0.46
SYNGAP1-209ENST00000635885 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
SYNGAP1-209ENST00000635885 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
SYNGAP1-209ENST00000635885 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms