RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 WBP1LQ9NX94 342 aa13.51□□□□□ -0.25
CHD2-217ENST00000629136 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
CHD2-217ENST00000629136 COL1A1P02452 1464 aaPredicted RBP13.5□□□□□ -0.25
CHD2-217ENST00000629136 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 FAM205AQ6ZU69 1335 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 PDE8BO95263 885 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 TRIM27P14373 513 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 MMP14P50281 582 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
CHD2-217ENST00000629136 GRM1Q13255 1194 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
CHD2-217ENST00000629136 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
CHD2-217ENST00000629136 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
CHD2-217ENST00000629136 GBA2Q9HCG7 927 aaPredicted RBP13.5□□□□□ -0.25
CHD2-217ENST00000629136 LRRFIP2Q9Y608 721 aaKnown RBP13.5□□□□□ -0.25
CHD2-217ENST00000629136 AOC2O75106 756 aa13.49□□□□□ -0.25
CHD2-217ENST00000629136 HUNKP57058 714 aa13.49□□□□□ -0.25
CHD2-217ENST00000629136 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
CHD2-217ENST00000629136 HDAC9Q9UKV0 1011 aa13.49□□□□□ -0.25
CHD2-217ENST00000629136 PCDHAC2Q9Y5I4 1007 aa13.49□□□□□ -0.25
CHD2-217ENST00000629136 EYA2O00167 538 aa13.48□□□□□ -0.25
CHD2-217ENST00000629136 FGFR2P21802 821 aa13.48□□□□□ -0.25
CHD2-217ENST00000629136 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
CHD2-217ENST00000629136 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
CHD2-217ENST00000629136 ATF7IPQ6VMQ6 1270 aa13.48□□□□□ -0.25
CHD2-217ENST00000629136 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
CHD2-217ENST00000629136 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
CHD2-217ENST00000629136 SSC5DA1L4H1 1573 aa13.48□□□□□ -0.25
CHD2-217ENST00000629136 AOX1Q06278 1338 aa13.47□□□□□ -0.25
CHD2-217ENST00000629136 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
CHD2-217ENST00000629136 MAP2K1Q02750 393 aaPredicted RBP13.47□□□□□ -0.25
CHD2-217ENST00000629136 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
CHD2-217ENST00000629136 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
CHD2-217ENST00000629136 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
CHD2-217ENST00000629136 C2orf69Q8N8R5 385 aa13.47□□□□□ -0.25
CHD2-217ENST00000629136 SIL1Q9H173 461 aa13.47□□□□□ -0.25
CHD2-217ENST00000629136 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
CHD2-217ENST00000629136 FAM155AB1AL88 458 aaPredicted RBP13.46□□□□□ -0.25
CHD2-217ENST00000629136 MAP2K2P36507 400 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 CFAP100Q494V2 611 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 PRAMEF18Q5VWM3 479 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 RGMBQ6NW40 437 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
CHD2-217ENST00000629136 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 AIDAQ96BJ3 306 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 ZIC5Q96T25 663 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 FBXO3Q9UK99 471 aa13.46□□□□□ -0.25
CHD2-217ENST00000629136 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
CHD2-217ENST00000629136 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
CHD2-217ENST00000629136 CIAO1O76071 339 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 GNAI3P08754 354 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 HSPA8P11142 646 aaKnown RBP13.45□□□□□ -0.26
CHD2-217ENST00000629136 CTCFP49711 727 aaPredicted RBP13.45□□□□□ -0.26
CHD2-217ENST00000629136 BCAMP50895 628 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 MTX1Q13505 466 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 GRIK5Q16478 980 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
CHD2-217ENST00000629136 SLC10A3P09131 477 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 FKBP1BP68106 108 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 NOGQ13253 232 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 MOB2Q70IA6 237 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 LPIN2Q92539 896 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 PRMT6Q96LA8 375 aaPredicted RBP13.44□□□□□ -0.26
CHD2-217ENST00000629136 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 TTF2Q9UNY4 1162 aaKnown RBP13.44□□□□□ -0.26
CHD2-217ENST00000629136 HDAC5Q9UQL6 1122 aa13.44□□□□□ -0.26
CHD2-217ENST00000629136 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
CHD2-217ENST00000629136 SLC5A1P13866 664 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 ZNF157P51786 506 aaPredicted RBP13.43□□□□□ -0.26
CHD2-217ENST00000629136 LBX1P52954 281 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
CHD2-217ENST00000629136 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 MAST2Q6P0Q8 1798 aa13.43□□□□□ -0.26
CHD2-217ENST00000629136 DOCK2Q92608 1830 aa13.42□□□□□ -0.26
CHD2-217ENST00000629136 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
CHD2-217ENST00000629136 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
CHD2-217ENST00000629136 IL15P40933 162 aaPredicted RBP13.42□□□□□ -0.26
CHD2-217ENST00000629136 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
CHD2-217ENST00000629136 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
CHD2-217ENST00000629136 MYO5AQ9Y4I1 1855 aaKnown RBP13.42□□□□□ -0.26
CHD2-217ENST00000629136 MYO1BO43795 1136 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
CHD2-217ENST00000629136 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHD2-217ENST00000629136 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 TBC1D22AQ8WUA7 517 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
CHD2-217ENST00000629136 FZD1Q9UP38 647 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms