RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 SFMBT2Q5VUG0 894 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MYSM1Q5VVJ2 828 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 NUGGCQ68CJ6 796 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 INTS3Q68E01 1043 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 MIS18BP1Q6P0N0 1132 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MTHFD1LQ6UB35 978 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 RBM43Q6ZSC3 357 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 B4GALNT4Q76KP1 1039 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 RSRC2Q7L4I2 434 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 LUZP1Q86V48 1076 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 LCA5Q86VQ0 697 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CHD1LQ86WJ1 897 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 KIAA0825Q8IV33 1275 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MYOCDQ8IZQ8 938 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CACTIN-AS1Q8N1I8 211 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GALNT15Q8N3T1 639 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 AFAP1Q8N556 730 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ZGPATQ8N5A5 531 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 MSANTD4Q8NCY6 345 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 LRRN4CLQ8ND94 238 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PHC3Q8NDX5 983 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 TRIM58Q8NG06 486 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ERMNQ8TAM6 284 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CCHCR1Q8TD31 782 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 LEO1Q8WVC0 666 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 LMBR1Q8WVP7 490 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 LZICQ8WZA0 190 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ARHGAP45Q92619 1136 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GCC1Q96CN9 775 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SPDL1Q96EA4 605 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 FAM163AQ96GL9 167 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 RBM41Q96IZ5 413 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 PPP1R13BQ96KQ4 1090 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SCLT1Q96NL6 688 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 FMNL2Q96PY5 1086 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MPHOSPH8Q99549 860 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 EPAS1Q99814 870 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GORASP1Q9BQQ3 440 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 RBM42Q9BTD8 480 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 YIPF2Q9BWQ6 316 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CARD11Q9BXL7 1154 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 TSGA10Q9BZW7 698 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 TRIM5Q9C035 493 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 NUP62CLQ9H1M0 184 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 TSPYL2Q9H2G4 693 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 FAM204AQ9H8W3 233 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 VIPAS39Q9H9C1 493 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PDE11AQ9HCR9 933 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CD248Q9HCU0 757 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SLC39A2Q9NP94 309 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 DDX19AQ9NUU7 478 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 SPATA7Q9P0W8 599 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 IMPACTQ9P2X3 320 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SWAP70Q9UH65 585 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ITGB1BP2Q9UKP3 347 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 RAB21Q9UL25 225 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CORO1CQ9ULV4 474 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 ADAMTS8Q9UP79 889 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ATP8A1Q9Y2Q0 1164 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 THRAP3Q9Y2W1 955 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 TMEM98Q9Y2Y6 226 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PCDHGC5Q9Y5F6 944 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GMEB1Q9Y692 573 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PARP3Q9Y6F1 533 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CAPN7Q9Y6W3 813 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 NSD2O96028 1365 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CARMIL1Q5VZK9 1371 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ITSN1Q15811 1721 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 KNDC1Q76NI1 1749 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CDC42BPBQ9Y5S2 1711 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GRIN2DO15399 1336 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 NPHP3Q7Z494 1330 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 EVC2Q86UK5 1308 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 SH3TC1Q8TE82 1336 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CDHR2Q9BYE9 1310 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 NOS1P29475 1434 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PTCH1Q13635 1447 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 NPATQ14207 1427 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 C9orf84Q5VXU9 1444 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ABCC3O15438 1527 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 DUOX2Q9NRD8 1548 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 TARBP1Q13395 1621 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 IQGAP3Q86VI3 1631 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MYO3AQ8NEV4 1616 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MADDQ8WXG6 1647 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 SPHKAPQ2M3C7 1700 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 KIAA1210Q9ULL0 1709 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CRYBG1Q9Y4K1 1723 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 FRMD3A2A2Y4 597 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ENO4A6NNW6 628 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 HMGB1P1B2RPK0 211 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 ANKRD65E5RJM6 399 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 F8VZ95 297 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MYO1FO00160 1098 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 NPHP1O15259 732 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 EIF3HO15372 352 aaKnown RBP eCLIP2.18□□□□□ -2.06
TCF4-264ENST00000628391 MEFVO15553 781 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 ZSCAN12O43309 604 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CEP104O60308 925 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PPFIA3O75145 1194 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms