RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-208	ENST00000625681	MAP3K11	Q16584	847 aa		28.87	■■■□□ 2.21
UBE3A-208	ENST00000625681	JAG2	Q9Y219	1238 aa		28.87	■■■□□ 2.21
UBE3A-208	ENST00000625681	PPP1R12B	O60237	982 aa	Predicted RBP	28.86	■■■□□ 2.21
UBE3A-208	ENST00000625681	PRMT6	Q96LA8	375 aa	Predicted RBP	28.86	■■■□□ 2.21
UBE3A-208	ENST00000625681	AOX1	Q06278	1338 aa		28.86	■■■□□ 2.21
UBE3A-208	ENST00000625681	ZNF646	O15015	1829 aa	Predicted RBP	28.85	■■■□□ 2.21
UBE3A-208	ENST00000625681	ZBTB48	P10074	688 aa	Predicted RBP	28.85	■■■□□ 2.21
UBE3A-208	ENST00000625681	CFAP100	Q494V2	611 aa		28.85	■■■□□ 2.21
UBE3A-208	ENST00000625681	NBPF12	Q5TAG4	269 aa	Predicted RBP	28.85	■■■□□ 2.21
UBE3A-208	ENST00000625681	VEZT	Q9HBM0	779 aa		28.85	■■■□□ 2.21
UBE3A-208	ENST00000625681	SSC5D	A1L4H1	1573 aa		28.84	■■■□□ 2.21
UBE3A-208	ENST00000625681	GJA5	P36382	358 aa		28.84	■■■□□ 2.21
UBE3A-208	ENST00000625681	MTMR14	Q8NCE2	650 aa		28.84	■■■□□ 2.21
UBE3A-208	ENST00000625681	IRS2	Q9Y4H2	1338 aa		28.84	■■■□□ 2.21
UBE3A-208	ENST00000625681	SPEF2	Q9C093	1822 aa		28.83	■■■□□ 2.21
UBE3A-208	ENST00000625681	TWISTNB	Q3B726	338 aa	Predicted RBP	28.83	■■■□□ 2.21
UBE3A-208	ENST00000625681	CD99L2	Q8TCZ2	262 aa		28.83	■■■□□ 2.21
UBE3A-208	ENST00000625681	SPDYE2B	A6NHP3	402 aa		28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	USP2	O75604	605 aa	Predicted RBP	28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	SPDYE6	P0CI01	402 aa		28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	CRHR2	Q13324	411 aa		28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	SUPT20HL1	Q3ZLR7	823 aa		28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	INTS3	Q68E01	1043 aa	Known RBP	28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	PTPN22	Q9Y2R2	807 aa		28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	BRCA2	P51587	3418 aa		28.82	■■■□□ 2.2
UBE3A-208	ENST00000625681	ANKRD18B	A2A2Z9	1011 aa		28.81	■■■□□ 2.2
UBE3A-208	ENST00000625681	GCC1	Q96CN9	775 aa		28.81	■■■□□ 2.2
UBE3A-208	ENST00000625681	PTPN18	Q99952	460 aa		28.81	■■■□□ 2.2
UBE3A-208	ENST00000625681	PPP2R3B	Q9Y5P8	575 aa		28.81	■■■□□ 2.2
UBE3A-208	ENST00000625681	MYO1B	O43795	1136 aa		28.8	■■■□□ 2.2
UBE3A-208	ENST00000625681	RBM5	P52756	815 aa	Known RBP eCLIP	28.8	■■■□□ 2.2
UBE3A-208	ENST00000625681	CAP1	Q01518	475 aa		28.8	■■■□□ 2.2
UBE3A-208	ENST00000625681	FLII	Q13045	1269 aa		28.8	■■■□□ 2.2
UBE3A-208	ENST00000625681	HABP4	Q5JVS0	413 aa	Known RBP	28.8	■■■□□ 2.2
UBE3A-208	ENST00000625681	COL1A1	P02452	1464 aa	Predicted RBP	28.79	■■■□□ 2.2
UBE3A-208	ENST00000625681	EN2	P19622	333 aa	Predicted RBP	28.79	■■■□□ 2.2
UBE3A-208	ENST00000625681	RASA3	Q14644	834 aa		28.79	■■■□□ 2.2
UBE3A-208	ENST00000625681	DNAAF4	Q8WXU2	420 aa		28.79	■■■□□ 2.2
UBE3A-208	ENST00000625681	ERO1A	Q96HE7	468 aa		28.79	■■■□□ 2.2
UBE3A-208	ENST00000625681	MYH16	Q9H6N6	1097 aa		28.79	■■■□□ 2.2
UBE3A-208	ENST00000625681	IL1R1	P14778	569 aa		28.78	■■■□□ 2.2
UBE3A-208	ENST00000625681	IREB2	P48200	963 aa	Known RBP	28.78	■■■□□ 2.2
UBE3A-208	ENST00000625681	FKBP5	Q13451	457 aa	Predicted RBP	28.78	■■■□□ 2.2
UBE3A-208	ENST00000625681	C15orf52	Q6ZUT6	534 aa	Known RBP	28.78	■■■□□ 2.2
UBE3A-208	ENST00000625681	CHMP3	Q9Y3E7	222 aa		28.78	■■■□□ 2.2
UBE3A-208	ENST00000625681	FOXO4	P98177	505 aa		28.77	■■■□□ 2.2
UBE3A-208	ENST00000625681	OTUD7B	Q6GQQ9	843 aa		28.77	■■■□□ 2.2
UBE3A-208	ENST00000625681	ZNF804A	Q7Z570	1209 aa		28.77	■■■□□ 2.2
UBE3A-208	ENST00000625681	LINS1	Q8NG48	757 aa		28.77	■■■□□ 2.2
UBE3A-208	ENST00000625681	EFCC1	Q9HA90	598 aa		28.77	■■■□□ 2.2
UBE3A-208	ENST00000625681	PLIN1	O60240	522 aa		28.76	■■■□□ 2.19
UBE3A-208	ENST00000625681	IFIT5	Q13325	482 aa	Known RBP	28.76	■■■□□ 2.19
UBE3A-208	ENST00000625681	ELP3	Q9H9T3	547 aa		28.76	■■■□□ 2.19
UBE3A-208	ENST00000625681	UNCX	A6NJT0	531 aa		28.75	■■■□□ 2.19
UBE3A-208	ENST00000625681	SP3	Q02447	781 aa		28.75	■■■□□ 2.19
UBE3A-208	ENST00000625681	ANKRD13A	Q8IZ07	590 aa		28.75	■■■□□ 2.19
UBE3A-208	ENST00000625681	ZNF594	Q96JF6	807 aa	Predicted RBP	28.75	■■■□□ 2.19
UBE3A-208	ENST00000625681	WWC1	Q8IX03	1113 aa		28.74	■■■□□ 2.19
UBE3A-208	ENST00000625681	TESPA1	A2RU30	521 aa	Predicted RBP	28.73	■■■□□ 2.19
UBE3A-208	ENST00000625681	ARMC5	Q96C12	935 aa		28.73	■■■□□ 2.19
UBE3A-208	ENST00000625681	OPTN	Q96CV9	577 aa		28.73	■■■□□ 2.19
UBE3A-208	ENST00000625681	MYH3	P11055	1940 aa		28.73	■■■□□ 2.19
UBE3A-208	ENST00000625681	FKBP1A	P62942	108 aa	Known RBP	28.72	■■■□□ 2.19
UBE3A-208	ENST00000625681	CDAN1	Q8IWY9	1227 aa		28.72	■■■□□ 2.19
UBE3A-208	ENST00000625681	CNKSR2	Q8WXI2	1034 aa		28.72	■■■□□ 2.19
UBE3A-208	ENST00000625681	EPHA10	Q5JZY3	1008 aa		28.71	■■■□□ 2.19
UBE3A-208	ENST00000625681	LMBR1L	Q6UX01	489 aa		28.71	■■■□□ 2.19
UBE3A-208	ENST00000625681	MS4A4A	Q96JQ5	239 aa		28.71	■■■□□ 2.19
UBE3A-208	ENST00000625681	TDRD3	Q9H7E2	651 aa	Known RBP	28.71	■■■□□ 2.19
UBE3A-208	ENST00000625681	ZNF70	Q9UC06	446 aa	Predicted RBP	28.71	■■■□□ 2.19
UBE3A-208	ENST00000625681		F6X3S4	739 aa		28.7	■■■□□ 2.18
UBE3A-208	ENST00000625681	CCDC184	Q52MB2	194 aa		28.7	■■■□□ 2.18
UBE3A-208	ENST00000625681	LDHAL6A	Q6ZMR3	332 aa		28.69	■■■□□ 2.18
UBE3A-208	ENST00000625681	CCDC27	Q2M243	656 aa		28.68	■■■□□ 2.18
UBE3A-208	ENST00000625681	SPDYE2	Q495Y8	402 aa		28.68	■■■□□ 2.18
UBE3A-208	ENST00000625681	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.68	■■■□□ 2.18
UBE3A-208	ENST00000625681	BRI3BP	Q8WY22	251 aa		28.68	■■■□□ 2.18
UBE3A-208	ENST00000625681	TTF2	Q9UNY4	1162 aa	Known RBP	28.68	■■■□□ 2.18
UBE3A-208	ENST00000625681	TCP10L2	B9ZVM9	353 aa		28.67	■■■□□ 2.18
UBE3A-208	ENST00000625681	MFSD14B	Q5SR56	506 aa		28.67	■■■□□ 2.18
UBE3A-208	ENST00000625681	CNNM1	Q9NRU3	951 aa		28.67	■■■□□ 2.18
UBE3A-208	ENST00000625681	MYC	P01106	439 aa	Predicted RBP	28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	GYG1	P46976	350 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	CCDC57	Q2TAC2	916 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	TAF7L	Q5H9L4	462 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	BEND3	Q5T5X7	828 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	TEPSIN	Q96N21	525 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	TMEM106C	Q9BVX2	250 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	TMEM39B	Q9GZU3	492 aa		28.66	■■■□□ 2.18
UBE3A-208	ENST00000625681	CCL15-CCL14	A0A0B4J2E2	113 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	VAMP4	O75379	141 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	TNFAIP1	Q13829	316 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	CCL15	Q16663	113 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	DZIP1L	Q8IYY4	767 aa	Known RBP	28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	ZNF333	Q96JL9	665 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	PTCH2	Q9Y6C5	1203 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	FAM205A	Q6ZU69	1335 aa		28.65	■■■□□ 2.18
UBE3A-208	ENST00000625681	TDRD7	Q8NHU6	1098 aa	Known RBP	28.64	■■■□□ 2.18
UBE3A-208	ENST00000625681	SERPINA10	Q9UK55	444 aa		28.64	■■■□□ 2.18
UBE3A-208	ENST00000625681	MAP3K9	P80192	1104 aa		28.63	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms