RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 C15orf52Q6ZUT6 534 aaKnown RBP24.96■■□□□ 1.59
R3HCC1-210ENST00000625275 ZNF594Q96JF6 807 aaPredicted RBP24.96■■□□□ 1.59
R3HCC1-210ENST00000625275 SNAP23O00161 211 aa24.96■■□□□ 1.59
R3HCC1-210ENST00000625275 NOGQ13253 232 aa24.96■■□□□ 1.59
R3HCC1-210ENST00000625275 CD209Q9NNX6 404 aa24.96■■□□□ 1.59
R3HCC1-210ENST00000625275 MMP14P50281 582 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 GTF2IP78347 998 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 RGMBQ6NW40 437 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 LDHAL6AQ6ZMR3 332 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 ITPRIPQ8IWB1 547 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 SUCLG2Q96I99 432 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 UTYO14607 1347 aa24.95■■□□□ 1.58
R3HCC1-210ENST00000625275 NBPF9Q3BBW0 867 aa24.94■■□□□ 1.58
R3HCC1-210ENST00000625275 CNNM1Q9NRU3 951 aa24.94■■□□□ 1.58
R3HCC1-210ENST00000625275 COG6Q9Y2V7 657 aa24.94■■□□□ 1.58
R3HCC1-210ENST00000625275 MYH13Q9UKX3 1938 aa24.93■■□□□ 1.58
R3HCC1-210ENST00000625275 NBPF7P0C2Y1 421 aaPredicted RBP24.93■■□□□ 1.58
R3HCC1-210ENST00000625275 ZNF804AQ7Z570 1209 aa24.93■■□□□ 1.58
R3HCC1-210ENST00000625275 KAZALD1Q96I82 304 aa24.93■■□□□ 1.58
R3HCC1-210ENST00000625275 USP44Q9H0E7 712 aa24.93■■□□□ 1.58
R3HCC1-210ENST00000625275 WNT10BO00744 389 aa24.92■■□□□ 1.58
R3HCC1-210ENST00000625275 CA12O43570 354 aa24.92■■□□□ 1.58
R3HCC1-210ENST00000625275 MVPQ14764 893 aaKnown RBP24.92■■□□□ 1.58
R3HCC1-210ENST00000625275 KIAA0825Q8IV33 1275 aa24.92■■□□□ 1.58
R3HCC1-210ENST00000625275 HDAC9Q9UKV0 1011 aa24.91■■□□□ 1.58
R3HCC1-210ENST00000625275 FAM155AB1AL88 458 aaPredicted RBP24.9■■□□□ 1.58
R3HCC1-210ENST00000625275 SASH1O94885 1247 aa24.9■■□□□ 1.58
R3HCC1-210ENST00000625275 CCDC102AQ96A19 550 aa24.9■■□□□ 1.58
R3HCC1-210ENST00000625275 ZIC5Q96T25 663 aa24.9■■□□□ 1.58
R3HCC1-210ENST00000625275 MEIS3Q99687 375 aa24.9■■□□□ 1.58
R3HCC1-210ENST00000625275 TSKSQ9UJT2 592 aa24.9■■□□□ 1.58
R3HCC1-210ENST00000625275 IL1R1P14778 569 aa24.89■■□□□ 1.58
R3HCC1-210ENST00000625275 ZNF157P51786 506 aaPredicted RBP24.89■■□□□ 1.58
R3HCC1-210ENST00000625275 FKBP1BP68106 108 aa24.89■■□□□ 1.58
R3HCC1-210ENST00000625275 SCAF8Q9UPN6 1271 aaKnown RBP24.89■■□□□ 1.58
R3HCC1-210ENST00000625275 RABL6Q3YEC7 729 aaPredicted RBP24.89■■□□□ 1.57
R3HCC1-210ENST00000625275 BICC1Q9H694 974 aaKnown RBP24.89■■□□□ 1.57
R3HCC1-210ENST00000625275 CERS5Q8N5B7 392 aa24.88■■□□□ 1.57
R3HCC1-210ENST00000625275 SLC10A3P09131 477 aa24.87■■□□□ 1.57
R3HCC1-210ENST00000625275 ZBED3Q96IU2 234 aaPredicted RBP24.87■■□□□ 1.57
R3HCC1-210ENST00000625275 DDX19BQ9UMR2 479 aa24.87■■□□□ 1.57
R3HCC1-210ENST00000625275 ZBTB7BO15156 539 aaPredicted RBP24.86■■□□□ 1.57
R3HCC1-210ENST00000625275 UBE4AQ14139 1066 aa24.86■■□□□ 1.57
R3HCC1-210ENST00000625275 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
R3HCC1-210ENST00000625275 ANKRD44Q8N8A2 993 aa24.86■■□□□ 1.57
R3HCC1-210ENST00000625275 PUS3Q9BZE2 481 aaKnown RBP24.86■■□□□ 1.57
R3HCC1-210ENST00000625275 COL1A1P02452 1464 aaPredicted RBP24.85■■□□□ 1.57
R3HCC1-210ENST00000625275 FKBP1AP62942 108 aaKnown RBP24.85■■□□□ 1.57
R3HCC1-210ENST00000625275 CRBNQ96SW2 442 aa24.85■■□□□ 1.57
R3HCC1-210ENST00000625275 MROH5Q6ZUA9 1318 aa24.85■■□□□ 1.57
R3HCC1-210ENST00000625275 UBTFL1P0CB47 393 aaPredicted RBP24.84■■□□□ 1.57
R3HCC1-210ENST00000625275 IRX6P78412 446 aaPredicted RBP24.84■■□□□ 1.57
R3HCC1-210ENST00000625275 PRAMEF18Q5VWM3 479 aa24.84■■□□□ 1.57
R3HCC1-210ENST00000625275 GNAI3P08754 354 aa24.83■■□□□ 1.57
R3HCC1-210ENST00000625275 KIF23Q02241 960 aaPredicted RBP24.83■■□□□ 1.57
R3HCC1-210ENST00000625275 RASAL3Q86YV0 1011 aa24.83■■□□□ 1.57
R3HCC1-210ENST00000625275 RIPOR2Q9Y4F9 1068 aa24.83■■□□□ 1.57
R3HCC1-210ENST00000625275 NF2P35240 595 aa24.83■■□□□ 1.56
R3HCC1-210ENST00000625275 DLGAP5Q15398 846 aa24.83■■□□□ 1.56
R3HCC1-210ENST00000625275 MTMR14Q8NCE2 650 aa24.83■■□□□ 1.56
R3HCC1-210ENST00000625275 JAG2Q9Y219 1238 aa24.83■■□□□ 1.56
R3HCC1-210ENST00000625275 LAMB1P07942 1786 aa24.82■■□□□ 1.56
R3HCC1-210ENST00000625275 MOB2Q70IA6 237 aa24.82■■□□□ 1.56
R3HCC1-210ENST00000625275 FAM205AQ6ZU69 1335 aa24.81■■□□□ 1.56
R3HCC1-210ENST00000625275 F8W031 263 aaPredicted RBP24.81■■□□□ 1.56
R3HCC1-210ENST00000625275 GYG1P46976 350 aa24.81■■□□□ 1.56
R3HCC1-210ENST00000625275 TDRD7Q8NHU6 1098 aaKnown RBP24.81■■□□□ 1.56
R3HCC1-210ENST00000625275 HIBADHP31937 336 aaKnown RBP24.8■■□□□ 1.56
R3HCC1-210ENST00000625275 TTLL12Q14166 644 aaPredicted RBP24.8■■□□□ 1.56
R3HCC1-210ENST00000625275 ZBTB40Q9NUA8 1239 aa24.8■■□□□ 1.56
R3HCC1-210ENST00000625275 SAGE1Q9NXZ1 904 aa24.8■■□□□ 1.56
R3HCC1-210ENST00000625275 LRRFIP2Q9Y608 721 aaKnown RBP24.8■■□□□ 1.56
R3HCC1-210ENST00000625275 UBE2Q2LH0YL09 131 aa24.79■■□□□ 1.56
R3HCC1-210ENST00000625275 CFAP100Q494V2 611 aa24.79■■□□□ 1.56
R3HCC1-210ENST00000625275 LRRC24Q50LG9 513 aa24.79■■□□□ 1.56
R3HCC1-210ENST00000625275 FAM84BQ96KN1 310 aaPredicted RBP24.79■■□□□ 1.56
R3HCC1-210ENST00000625275 METTL24Q5JXM2 366 aa24.78■■□□□ 1.56
R3HCC1-210ENST00000625275 ABHD8Q96I13 439 aa24.78■■□□□ 1.56
R3HCC1-210ENST00000625275 CHMP4BQ9H444 224 aaKnown RBP24.78■■□□□ 1.56
R3HCC1-210ENST00000625275 C1orf115Q9H7X2 142 aa24.78■■□□□ 1.56
R3HCC1-210ENST00000625275 PCDHAC2Q9Y5I4 1007 aa24.78■■□□□ 1.56
R3HCC1-210ENST00000625275 OTOFQ9HC10 1997 aa24.78■■□□□ 1.56
R3HCC1-210ENST00000625275 SPDYE2BA6NHP3 402 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 GNAI2P04899 355 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 SPDYE6P0CI01 402 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 MFSD14BQ5SR56 506 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 VGLL2Q8N8G2 317 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 EXOC6Q8TAG9 804 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 HDAC5Q9UQL6 1122 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 MYO1BO43795 1136 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 REM2Q8IYK8 340 aaPredicted RBP24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 KLHDC4Q8TBB5 520 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 CSRNP1Q96S65 589 aa24.77■■□□□ 1.56
R3HCC1-210ENST00000625275 DEFB129Q9H1M3 183 aa24.76■■□□□ 1.55
R3HCC1-210ENST00000625275 SSC5DA1L4H1 1573 aa24.75■■□□□ 1.55
R3HCC1-210ENST00000625275 PDE8BO95263 885 aa24.75■■□□□ 1.55
R3HCC1-210ENST00000625275 ARMC9Q7Z3E5 817 aa24.75■■□□□ 1.55
R3HCC1-210ENST00000625275 VPS37DQ86XT2 251 aa24.75■■□□□ 1.55
R3HCC1-210ENST00000625275 RNF186Q9NXI6 227 aa24.75■■□□□ 1.55
R3HCC1-210ENST00000625275 PPP2R3BQ9Y5P8 575 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms