RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 ALDH1L1O75891 902 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 TBC1D8O95759 1140 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 KCNJ4P48050 445 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 PRKG1Q13976 671 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 REM2Q8IYK8 340 aaPredicted RBP11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 SUCLG2Q96I99 432 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 R3HDMLQ9H3Y0 253 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 C9orf78Q9NZ63 289 aaPredicted RBP11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 JAG2Q9Y219 1238 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
PCDHB9-202ENST00000623266 FKBP1AP62942 108 aaKnown RBP11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 DLGAP5Q15398 846 aa11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 SRCIN1Q9C0H9 1055 aa11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 HDAC9Q9UKV0 1011 aa11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 UTYO14607 1347 aa11.57□□□□□ -0.56
PCDHB9-202ENST00000623266 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 F8W031 263 aaPredicted RBP11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 TTLL12Q14166 644 aaPredicted RBP11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 CNNM1Q9NRU3 951 aa11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 FAM205AQ6ZU69 1335 aa11.56□□□□□ -0.56
PCDHB9-202ENST00000623266 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 GYG1P46976 350 aa11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 UBE4AQ14139 1066 aa11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 GRIK5Q16478 980 aa11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 NBPF12Q5TAG4 269 aaPredicted RBP11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 ZNF804AQ7Z570 1209 aa11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 APOBEC3FQ8IUX4 373 aaKnown RBP11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 ANGEL1Q9UNK9 670 aaKnown RBP11.55□□□□□ -0.56
PCDHB9-202ENST00000623266 CLRN2A0PK11 232 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 NF2P35240 595 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 SPRYD7Q5W111 196 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 ARMC9Q7Z3E5 817 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 FBXO33Q7Z6M2 555 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 ZNF296Q8WUU4 475 aaPredicted RBP11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 CLMNQ96JQ2 1002 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
PCDHB9-202ENST00000623266 GPR25O00155 361 aa11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 HIBADHP31937 336 aaKnown RBP11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 SLFN5Q08AF3 891 aa11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 CTU1Q7Z7A3 348 aaKnown RBP11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 CDCA7LQ96GN5 454 aa11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
PCDHB9-202ENST00000623266 GJA5P36382 358 aa11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 RASA3Q14644 834 aa11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 TEPSINQ96N21 525 aa11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 ZNF70Q9UC06 446 aaPredicted RBP11.52□□□□□ -0.57
PCDHB9-202ENST00000623266 PDE8BO95263 885 aa11.51□□□□□ -0.57
PCDHB9-202ENST00000623266 MFSD14BQ5SR56 506 aa11.51□□□□□ -0.57
PCDHB9-202ENST00000623266 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
PCDHB9-202ENST00000623266 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
PCDHB9-202ENST00000623266 TTF2Q9UNY4 1162 aaKnown RBP11.51□□□□□ -0.57
PCDHB9-202ENST00000623266 IQSEC3Q9UPP2 1182 aaPredicted RBP11.51□□□□□ -0.57
PCDHB9-202ENST00000623266 IGF2BP3O00425 579 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 PPP1R12BO60237 982 aaPredicted RBP11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 RFX5P48382 616 aaPredicted RBP11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 SOX10P56693 466 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 INHBEP58166 350 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 WNK4Q96J92 1243 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 PTPN18Q99952 460 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 SERPINA10Q9UK55 444 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 PPP2R3BQ9Y5P8 575 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
PCDHB9-202ENST00000623266 LAMB1P07942 1786 aa11.49□□□□□ -0.57
PCDHB9-202ENST00000623266 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
PCDHB9-202ENST00000623266 E9PSI1 815 aa11.49□□□□□ -0.57
PCDHB9-202ENST00000623266 MYO1BO43795 1136 aa11.49□□□□□ -0.57
PCDHB9-202ENST00000623266 FGFR2P21802 821 aa11.49□□□□□ -0.57
PCDHB9-202ENST00000623266 BCAMP50895 628 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms