RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
TARDBP-223ENST00000620632 ZNF280AP59817 542 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-223ENST00000620632 C1QTNF8P60827 252 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-223ENST00000620632 GRIK5Q16478 980 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 VPS37DQ86XT2 251 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-223ENST00000620632 EXOC6Q8TAG9 804 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 RBM46Q8TBY0 533 aaKnown RBP13.34□□□□□ -0.27
TARDBP-223ENST00000620632 FPGT-TNNI3KV9GXZ4 949 aa13.34□□□□□ -0.27
TARDBP-223ENST00000620632 HMMRO75330 724 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-223ENST00000620632 TBC1D10BQ4KMP7 808 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-223ENST00000620632 LDHDQ86WU2 507 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 EAF2Q96CJ1 260 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-223ENST00000620632 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 DBNDD2Q9BQY9 259 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 GPR108Q9NPR9 543 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 TLR7Q9NYK1 1049 aaKnown RBP13.33□□□□□ -0.28
TARDBP-223ENST00000620632 AKAP2Q9Y2D5 859 aa13.33□□□□□ -0.28
TARDBP-223ENST00000620632 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-223ENST00000620632 H7C1D1 291 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 APBB1O00213 710 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 FKBP1AP62942 108 aaKnown RBP13.32□□□□□ -0.28
TARDBP-223ENST00000620632 MFSD14BQ5SR56 506 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 RBM26Q5T8P6 1007 aaKnown RBP13.32□□□□□ -0.28
TARDBP-223ENST00000620632 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-223ENST00000620632 PNMA8AQ86V59 439 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-223ENST00000620632 RHPN1Q8TCX5 695 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
TARDBP-223ENST00000620632 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
TARDBP-223ENST00000620632 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-223ENST00000620632 RASGRF1Q13972 1273 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 SCARF1Q14162 830 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 KIF4BQ2VIQ3 1234 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 MAP1SQ66K74 1059 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-223ENST00000620632 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 SMC1BQ8NDV3 1235 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-223ENST00000620632 MYOZ2Q9NPC6 264 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 AOX1Q06278 1338 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 MYH2Q9UKX2 1941 aa13.31□□□□□ -0.28
TARDBP-223ENST00000620632 FRAT2O75474 233 aaPredicted RBP13.3□□□□□ -0.28
TARDBP-223ENST00000620632 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
TARDBP-223ENST00000620632 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
TARDBP-223ENST00000620632 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
TARDBP-223ENST00000620632 ZBTB22O15209 634 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
TARDBP-223ENST00000620632 ITGBL1O95965 494 aaPredicted RBP13.29□□□□□ -0.28
TARDBP-223ENST00000620632 ARID4AP29374 1257 aaPredicted RBP13.29□□□□□ -0.28
TARDBP-223ENST00000620632 MCAMP43121 646 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.28
TARDBP-223ENST00000620632 FSTL1Q12841 308 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 KIF1BPQ96EK5 621 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 DCTPP1Q9H773 170 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 DOCK2Q92608 1830 aa13.29□□□□□ -0.28
TARDBP-223ENST00000620632 WNT10BO00744 389 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 SEMA3EO15041 775 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 NBPF9Q3BBW0 867 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 AACSQ86V21 672 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 ZBED3Q96IU2 234 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-223ENST00000620632 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
TARDBP-223ENST00000620632 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
TARDBP-223ENST00000620632 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
TARDBP-223ENST00000620632 MAST2Q6P0Q8 1798 aa13.27□□□□□ -0.28
TARDBP-223ENST00000620632 TRAF5O00463 557 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 PRDX5P30044 214 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 OGFOD1Q8N543 542 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 TBC1D22AQ8WUA7 517 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 BCL11AQ9H165 835 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
TARDBP-223ENST00000620632 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 HDAC9Q9UKV0 1011 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 PASKQ96RG2 1323 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 SALL1Q9NSC2 1324 aa13.27□□□□□ -0.29
TARDBP-223ENST00000620632 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-223ENST00000620632 PDS5AQ29RF7 1337 aaKnown RBP13.26□□□□□ -0.29
TARDBP-223ENST00000620632 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
TARDBP-223ENST00000620632 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
TARDBP-223ENST00000620632 GORABQ5T7V8 394 aa13.26□□□□□ -0.29
TARDBP-223ENST00000620632 SPATA5Q8NB90 893 aa13.26□□□□□ -0.29
TARDBP-223ENST00000620632 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
TARDBP-223ENST00000620632 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
TARDBP-223ENST00000620632 PRMT6Q96LA8 375 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-223ENST00000620632 GLIS2Q9BZE0 524 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-223ENST00000620632 LRRCC1Q9C099 1032 aa13.26□□□□□ -0.29
TARDBP-223ENST00000620632 CEP350Q5VT06 3117 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms