RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PYM1Q9BRP8 204 aaKnown RBP9.53□□□□□ -0.88
ALMS1-208ENST00000620466 EFCAB6Q5THR3 1501 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 HECW2Q9P2P5 1572 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 FERMT2Q96AC1 680 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 KAT14Q9H8E8 782 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 NDUFB9Q9Y6M9 179 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 TMEM266Q2M3C6 531 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 CCDC91Q7Z6B0 441 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 SIRT2Q8IXJ6 389 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 CCDC178Q5BJE1 867 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 SSH3Q8TE77 659 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
ALMS1-208ENST00000620466 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.53□□□□□ -0.88
ALMS1-208ENST00000620466 PTCH1Q13635 1447 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 GLI2P10070 1586 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 E9PCH4 1651 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 N4BP3O15049 544 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 USO1O60763 962 aaKnown RBP9.53□□□□□ -0.88
ALMS1-208ENST00000620466 CYP7A1P22680 504 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 IFIT1BQ5T764 474 aaKnown RBP9.53□□□□□ -0.88
ALMS1-208ENST00000620466 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 CABLES1Q8TDN4 633 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 DHX58Q96C10 678 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 DCAF5Q96JK2 942 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 CTAGE1Q96RT6 745 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 LLPHQ9BRT6 129 aaKnown RBP9.53□□□□□ -0.88
ALMS1-208ENST00000620466 TSPY2A6NKD2 308 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 KIF5BP33176 963 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 TERF1P54274 439 aa9.53□□□□□ -0.88
ALMS1-208ENST00000620466 RMND1Q9NWS8 449 aa9.52□□□□□ -0.88
ALMS1-208ENST00000620466 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 JAK2O60674 1132 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 ZNF853P0CG23 659 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 DRC1Q96MC2 740 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 GOPCQ9HD26 462 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 KDRP35968 1356 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 ZNF500O60304 480 aaPredicted RBP9.52□□□□□ -0.89
ALMS1-208ENST00000620466 FGFR1OPO95684 399 aaKnown RBP9.52□□□□□ -0.89
ALMS1-208ENST00000620466 CDC5LQ99459 802 aaKnown RBP9.52□□□□□ -0.89
ALMS1-208ENST00000620466 TBX22Q9Y458 520 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 TUBB4AP04350 444 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 CCDC152Q4G0S7 254 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 MAGEB6Q8N7X4 407 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 GTPBP4Q9BZE4 634 aaKnown RBP9.52□□□□□ -0.89
ALMS1-208ENST00000620466 ELP1O95163 1332 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 EXOC5O00471 708 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 CETN2P41208 172 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 LMAN1P49257 510 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 DNA2P51530 1060 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 ST5P78524 1137 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 PDE4BQ07343 736 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 TMTC2Q8N394 836 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 IL17REQ8NFR9 667 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 PLBD2Q8NHP8 589 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 OGFRQ9NZT2 677 aa9.52□□□□□ -0.89
ALMS1-208ENST00000620466 TIMM10P62072 90 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 SHTN1A0MZ66 631 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 KCNQ3O43525 872 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 FAM114A1Q8IWE2 563 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 ESR2Q92731 530 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 A0A1B0GUL7 405 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 CALML4Q96GE6 196 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 TM6SF1Q9BZW5 370 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 LSG1Q9H089 658 aaKnown RBP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 IQSEC3Q9UPP2 1182 aaPredicted RBP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 CDK12Q9NYV4 1490 aaPredicted RBP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 TCP11L1Q9NUJ3 509 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 STAT6P42226 847 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 KARSQ15046 597 aaKnown RBP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 TDRD12Q587J7 1177 aaKnown RBP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 UNC5CLQ8IV45 518 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
ALMS1-208ENST00000620466 METP08581 1390 aa9.51□□□□□ -0.89
ALMS1-208ENST00000620466 ERCC6L2Q5T890 1561 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 ABCC3O15438 1527 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 KRT2P35908 639 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 AMPD3Q01432 767 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 ALS2CR12Q96Q35 445 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 SLC52A2Q9HAB3 445 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 SMAP1Q8IYB5 467 aaPredicted RBP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 ZNF594Q96JF6 807 aaPredicted RBP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 OSBPL3Q9H4L5 887 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 ZSWIM6Q9HCJ5 1215 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 BMP15O95972 392 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 CCDC175P0C221 793 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 CA8P35219 290 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 BEND3Q5T5X7 828 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 CTR9Q6PD62 1173 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 CTNNBL1Q8WYA6 563 aaPredicted RBP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 RAB34Q9BZG1 259 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms