RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 ZBED3Q96IU2 234 aaPredicted RBP21.8■■□□□ 1.08
PRKN-208ENST00000610470 SCAF8Q9UPN6 1271 aaKnown RBP21.8■■□□□ 1.08
PRKN-208ENST00000610470 PAPPA2Q9BXP8 1791 aa21.79■■□□□ 1.08
PRKN-208ENST00000610470 HIBADHP31937 336 aaKnown RBP21.79■■□□□ 1.08
PRKN-208ENST00000610470 NF2P35240 595 aa21.79■■□□□ 1.08
PRKN-208ENST00000610470 DLGAP5Q15398 846 aa21.79■■□□□ 1.08
PRKN-208ENST00000610470 SLC10A3P09131 477 aa21.78■■□□□ 1.08
PRKN-208ENST00000610470 METTL24Q5JXM2 366 aa21.78■■□□□ 1.08
PRKN-208ENST00000610470 MTMR14Q8NCE2 650 aa21.78■■□□□ 1.08
PRKN-208ENST00000610470 ZIC5Q96T25 663 aa21.78■■□□□ 1.08
PRKN-208ENST00000610470 F8W031 263 aaPredicted RBP21.77■■□□□ 1.08
PRKN-208ENST00000610470 GYG1P46976 350 aa21.77■■□□□ 1.08
PRKN-208ENST00000610470 KIF23Q02241 960 aaPredicted RBP21.77■■□□□ 1.08
PRKN-208ENST00000610470 PRAMEF18Q5VWM3 479 aa21.77■■□□□ 1.08
PRKN-208ENST00000610470 TDRD7Q8NHU6 1098 aaKnown RBP21.77■■□□□ 1.08
PRKN-208ENST00000610470 FAM84BQ96KN1 310 aaPredicted RBP21.77■■□□□ 1.08
PRKN-208ENST00000610470 API5Q9BZZ5 524 aaKnown RBP21.77■■□□□ 1.08
PRKN-208ENST00000610470 TSKSQ9UJT2 592 aa21.77■■□□□ 1.08
PRKN-208ENST00000610470 NOB1Q9ULX3 412 aaKnown RBP21.77■■□□□ 1.08
PRKN-208ENST00000610470 JAG2Q9Y219 1238 aa21.77■■□□□ 1.08
PRKN-208ENST00000610470 FAM205AQ6ZU69 1335 aa21.77■■□□□ 1.07
PRKN-208ENST00000610470 TTLL12Q14166 644 aaPredicted RBP21.76■■□□□ 1.07
PRKN-208ENST00000610470 LRRC24Q50LG9 513 aa21.76■■□□□ 1.07
PRKN-208ENST00000610470 MYO1BO43795 1136 aa21.75■■□□□ 1.07
PRKN-208ENST00000610470 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
PRKN-208ENST00000610470 VPS37DQ86XT2 251 aa21.75■■□□□ 1.07
PRKN-208ENST00000610470 RASAL3Q86YV0 1011 aa21.75■■□□□ 1.07
PRKN-208ENST00000610470 REM2Q8IYK8 340 aaPredicted RBP21.75■■□□□ 1.07
PRKN-208ENST00000610470 COL1A1P02452 1464 aaPredicted RBP21.75■■□□□ 1.07
PRKN-208ENST00000610470 PDE8BO95263 885 aa21.74■■□□□ 1.07
PRKN-208ENST00000610470 CAVIN4Q5BKX8 364 aa21.74■■□□□ 1.07
PRKN-208ENST00000610470 SPDYE2BA6NHP3 402 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 UBE2Q2LH0YL09 131 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 UBTFL1P0CB47 393 aaPredicted RBP21.73■■□□□ 1.07
PRKN-208ENST00000610470 SPDYE6P0CI01 402 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 MFSD14BQ5SR56 506 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 MOB2Q70IA6 237 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 FBXO33Q7Z6M2 555 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 VGLL2Q8N8G2 317 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 KLHDC4Q8TBB5 520 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 SAGE1Q9NXZ1 904 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 HDAC5Q9UQL6 1122 aa21.73■■□□□ 1.07
PRKN-208ENST00000610470 RBM5P52756 815 aaKnown RBP eCLIP21.72■■□□□ 1.07
PRKN-208ENST00000610470 RARSP54136 660 aaKnown RBP21.72■■□□□ 1.07
PRKN-208ENST00000610470 ARMC9Q7Z3E5 817 aa21.72■■□□□ 1.07
PRKN-208ENST00000610470 DEFB129Q9H1M3 183 aa21.72■■□□□ 1.07
PRKN-208ENST00000610470 PPP2R3BQ9Y5P8 575 aa21.72■■□□□ 1.07
PRKN-208ENST00000610470 PRMT6Q96LA8 375 aaPredicted RBP21.71■■□□□ 1.07
PRKN-208ENST00000610470 TTF2Q9UNY4 1162 aaKnown RBP21.71■■□□□ 1.07
PRKN-208ENST00000610470 KIF16BQ96L93 1317 aa21.71■■□□□ 1.07
PRKN-208ENST00000610470 EYA2O00167 538 aa21.7■■□□□ 1.06
PRKN-208ENST00000610470 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
PRKN-208ENST00000610470 IFIT1P09914 478 aaKnown RBP21.7■■□□□ 1.06
PRKN-208ENST00000610470 RFX5P48382 616 aaPredicted RBP21.7■■□□□ 1.06
PRKN-208ENST00000610470 PUM3Q15397 648 aaKnown RBP21.7■■□□□ 1.06
PRKN-208ENST00000610470 ARHGAP45Q92619 1136 aa21.7■■□□□ 1.06
PRKN-208ENST00000610470 CSRNP1Q96S65 589 aa21.7■■□□□ 1.06
PRKN-208ENST00000610470 SERPINA10Q9UK55 444 aa21.7■■□□□ 1.06
PRKN-208ENST00000610470 PCDHAC2Q9Y5I4 1007 aa21.7■■□□□ 1.06
PRKN-208ENST00000610470 CLRN2A0PK11 232 aa21.69■■□□□ 1.06
PRKN-208ENST00000610470 PTPN12Q05209 780 aaKnown RBP21.69■■□□□ 1.06
PRKN-208ENST00000610470 TBC1D22AQ8WUA7 517 aa21.69■■□□□ 1.06
PRKN-208ENST00000610470 VEZTQ9HBM0 779 aa21.69■■□□□ 1.06
PRKN-208ENST00000610470 ECM29Q5VYK3 1845 aa21.69■■□□□ 1.06
PRKN-208ENST00000610470 CHAF1AQ13111 956 aaPredicted RBP21.68■■□□□ 1.06
PRKN-208ENST00000610470 PRKG1Q13976 671 aa21.68■■□□□ 1.06
PRKN-208ENST00000610470 RNF186Q9NXI6 227 aa21.68■■□□□ 1.06
PRKN-208ENST00000610470 FBXO3Q9UK99 471 aa21.68■■□□□ 1.06
PRKN-208ENST00000610470 IQSEC3Q9UPP2 1182 aaPredicted RBP21.68■■□□□ 1.06
PRKN-208ENST00000610470 TRPA1O75762 1119 aa21.67■■□□□ 1.06
PRKN-208ENST00000610470 FGFR2P21802 821 aa21.67■■□□□ 1.06
PRKN-208ENST00000610470 SUPT20HL1Q3ZLR7 823 aa21.67■■□□□ 1.06
PRKN-208ENST00000610470 ABHD8Q96I13 439 aa21.67■■□□□ 1.06
PRKN-208ENST00000610470 ANGEL1Q9UNK9 670 aaKnown RBP21.67■■□□□ 1.06
PRKN-208ENST00000610470 ARAP2Q8WZ64 1704 aa21.66■■□□□ 1.06
PRKN-208ENST00000610470 PPP1R12BO60237 982 aaPredicted RBP21.66■■□□□ 1.06
PRKN-208ENST00000610470 SLC5A1P13866 664 aa21.66■■□□□ 1.06
PRKN-208ENST00000610470 BCAMP50895 628 aa21.66■■□□□ 1.06
PRKN-208ENST00000610470 TNFAIP1Q13829 316 aa21.66■■□□□ 1.06
PRKN-208ENST00000610470 LPIN2Q92539 896 aa21.66■■□□□ 1.06
PRKN-208ENST00000610470 LRRFIP2Q9Y608 721 aaKnown RBP21.66■■□□□ 1.06
PRKN-208ENST00000610470 AKAP11Q9UKA4 1901 aa21.65■■□□□ 1.06
PRKN-208ENST00000610470 IPO8O15397 1037 aaKnown RBP21.65■■□□□ 1.06
PRKN-208ENST00000610470 CIAO1O76071 339 aa21.65■■□□□ 1.06
PRKN-208ENST00000610470 CRKP46108 304 aa21.65■■□□□ 1.06
PRKN-208ENST00000610470 SPDYE2Q495Y8 402 aa21.65■■□□□ 1.06
PRKN-208ENST00000610470 LDLRAD1Q5T700 205 aa21.65■■□□□ 1.06
PRKN-208ENST00000610470 AOX1Q06278 1338 aa21.64■■□□□ 1.05
PRKN-208ENST00000610470 HDLBPQ00341 1268 aaKnown RBP21.64■■□□□ 1.05
PRKN-208ENST00000610470 MAP3K11Q16584 847 aa21.64■■□□□ 1.05
PRKN-208ENST00000610470 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
PRKN-208ENST00000610470 INTS3Q68E01 1043 aaKnown RBP21.64■■□□□ 1.05
PRKN-208ENST00000610470 ATG9AQ7Z3C6 839 aa21.64■■□□□ 1.05
PRKN-208ENST00000610470 DZIP1LQ8IYY4 767 aaKnown RBP21.64■■□□□ 1.05
PRKN-208ENST00000610470 MEIS3Q99687 375 aa21.64■■□□□ 1.05
PRKN-208ENST00000610470 SIL1Q9H173 461 aa21.64■■□□□ 1.05
PRKN-208ENST00000610470 ZNF70Q9UC06 446 aaPredicted RBP21.64■■□□□ 1.05
PRKN-208ENST00000610470 CASP8AP2Q9UKL3 1982 aa21.63■■□□□ 1.05
PRKN-208ENST00000610470 GNAI3P08754 354 aa21.63■■□□□ 1.05
PRKN-208ENST00000610470 RASA3Q14644 834 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms