RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
CTCFL-219ENST00000608720 AFDNP55196 1824 aaKnown RBP17.09■□□□□ 0.33
CTCFL-219ENST00000608720 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.33
CTCFL-219ENST00000608720 SLC20A2Q08357 652 aa17.08■□□□□ 0.33
CTCFL-219ENST00000608720 CCDC158Q5M9N0 1113 aa17.08■□□□□ 0.33
CTCFL-219ENST00000608720 CHST3Q7LGC8 479 aa17.08■□□□□ 0.33
CTCFL-219ENST00000608720 CHRNA2Q15822 529 aa17.08■□□□□ 0.32
CTCFL-219ENST00000608720 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
CTCFL-219ENST00000608720 ZNF771Q7L3S4 317 aaPredicted RBP17.08■□□□□ 0.32
CTCFL-219ENST00000608720 FMR1NBQ8N0W7 255 aaPredicted RBP17.08■□□□□ 0.32
CTCFL-219ENST00000608720 CCDC112Q8NEF3 446 aa17.08■□□□□ 0.32
CTCFL-219ENST00000608720 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.32
CTCFL-219ENST00000608720 OSBP2Q969R2 916 aa17.08■□□□□ 0.32
CTCFL-219ENST00000608720 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.32
CTCFL-219ENST00000608720 CGNQ9P2M7 1197 aaKnown RBP17.08■□□□□ 0.32
CTCFL-219ENST00000608720 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
CTCFL-219ENST00000608720 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.32
CTCFL-219ENST00000608720 TTLL5Q6EMB2 1281 aa17.07■□□□□ 0.32
CTCFL-219ENST00000608720 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
CTCFL-219ENST00000608720 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
CTCFL-219ENST00000608720 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
CTCFL-219ENST00000608720 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
CTCFL-219ENST00000608720 CCDC66A2RUB6 948 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 CEP135Q66GS9 1140 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 CREBRFQ8IUR6 639 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 YEATS4O95619 227 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 SKILP12757 684 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTCFL-219ENST00000608720 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
CTCFL-219ENST00000608720 SF3A1Q15459 793 aaKnown RBP17.06■□□□□ 0.32
CTCFL-219ENST00000608720 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
CTCFL-219ENST00000608720 A1BGP04217 495 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 SLFN14P0C7P3 912 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 GSDMDP57764 484 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 STK38Q15208 465 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 PUS3Q9BZE2 481 aaKnown RBP17.05■□□□□ 0.32
CTCFL-219ENST00000608720 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 COL18A1P39060 1754 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 CCDC57Q2TAC2 916 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 AOPEPQ8N6M6 819 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
CTCFL-219ENST00000608720 BPIFA3Q9BQP9 254 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 ZBTB3Q9H5J0 574 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 KCND1Q9NSA2 647 aa17.05■□□□□ 0.32
CTCFL-219ENST00000608720 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 PPFIA3O75145 1194 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
CTCFL-219ENST00000608720 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 KIAA1468Q9P260 1216 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 IMPACTQ9P2X3 320 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 GLI3P10071 1580 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 A0A1B0GVL5 298 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 PRC1O43663 620 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 FGAP02671 866 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 NDUFA8P51970 172 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 ARID5BQ14865 1188 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 PTPN14Q15678 1187 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 MB21D2Q8IYB1 491 aaPredicted RBP17.04■□□□□ 0.32
CTCFL-219ENST00000608720 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
CTCFL-219ENST00000608720 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
CTCFL-219ENST00000608720 CLIC4Q9Y696 253 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 CPDO75976 1380 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
CTCFL-219ENST00000608720 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.03■□□□□ 0.32
CTCFL-219ENST00000608720 SPTLC2O15270 562 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 CCZ1BP86790 482 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 CCZ1P86791 482 aaPredicted RBP17.03■□□□□ 0.32
CTCFL-219ENST00000608720 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 APPBP2Q92624 585 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
CTCFL-219ENST00000608720 LAMB4A4D0S4 1761 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
CTCFL-219ENST00000608720 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 FOXP2O15409 715 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 NYAP1Q6ZVC0 841 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 ISCA1Q9BUE6 129 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
CTCFL-219ENST00000608720 ABCC12Q96J65 1359 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 CPLX1O14810 134 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 HAND2P61296 217 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
CTCFL-219ENST00000608720 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.32
CTCFL-219ENST00000608720 HPS5Q9UPZ3 1129 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms