RNA–Protein interactions for RNA: ENST00000602239.1

SHKBP1-228, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-228ENST00000602239 F8W031 263 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-228ENST00000602239 RGS19P49795 217 aa19.94■□□□□ 0.78
SHKBP1-228ENST00000602239 PTPN12Q05209 780 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-228ENST00000602239 PUS3Q9BZE2 481 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-228ENST00000602239 CNNM1Q9NRU3 951 aa19.94■□□□□ 0.78
SHKBP1-228ENST00000602239 NBPF7P0C2Y1 421 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 NF2P35240 595 aa19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 MKRN3Q13064 507 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 DLGAP5Q15398 846 aa19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 ZNF804AQ7Z570 1209 aa19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 APOBEC3FQ8IUX4 373 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 REM2Q8IYK8 340 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-228ENST00000602239 MTMR14Q8NCE2 650 aa19.92■□□□□ 0.78
SHKBP1-228ENST00000602239 PRMT6Q96LA8 375 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-228ENST00000602239 DEFB129Q9H1M3 183 aa19.92■□□□□ 0.78
SHKBP1-228ENST00000602239 AOX1Q06278 1338 aa19.92■□□□□ 0.78
SHKBP1-228ENST00000602239 A0A1B0GUL6 1792 aa19.92■□□□□ 0.78
SHKBP1-228ENST00000602239 TBC1D8O95759 1140 aa19.91■□□□□ 0.78
SHKBP1-228ENST00000602239 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
SHKBP1-228ENST00000602239 MRPL50Q8N5N7 158 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-228ENST00000602239 CLRN2A0PK11 232 aa19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 GYG1P46976 350 aa19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 TM4SF4P48230 202 aa19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 LDLRAD1Q5T700 205 aa19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 ARMC9Q7Z3E5 817 aa19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 ANGEL1Q9UNK9 670 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 RIPOR2Q9Y4F9 1068 aa19.9■□□□□ 0.78
SHKBP1-228ENST00000602239 SPDYE2BA6NHP3 402 aa19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 UTYO14607 1347 aa19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 SPDYE6P0CI01 402 aa19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 FKBP1AP62942 108 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 MLLT1Q03111 559 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 FAM84BQ96KN1 310 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 BICC1Q9H694 974 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-228ENST00000602239 UBE4AQ14139 1066 aa19.88■□□□□ 0.77
SHKBP1-228ENST00000602239 TDRD7Q8NHU6 1098 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-228ENST00000602239 FAM205AQ6ZU69 1335 aa19.87■□□□□ 0.77
SHKBP1-228ENST00000602239 HIBADHP31937 336 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-228ENST00000602239 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-228ENST00000602239 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 LRRC24Q50LG9 513 aa19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 NBPF12Q5TAG4 269 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 SPRYD7Q5W111 196 aa19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 CTU1Q7Z7A3 348 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 ANKRD44Q8N8A2 993 aa19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 ZNF296Q8WUU4 475 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 SSH1Q8WYL5 1049 aa19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 CLMNQ96JQ2 1002 aa19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 R3HDMLQ9H3Y0 253 aa19.86■□□□□ 0.77
SHKBP1-228ENST00000602239 MYO1BO43795 1136 aa19.85■□□□□ 0.77
SHKBP1-228ENST00000602239 RABL6Q3YEC7 729 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-228ENST00000602239 MFSD14BQ5SR56 506 aa19.85■□□□□ 0.77
SHKBP1-228ENST00000602239 SLC10A4Q96EP9 437 aa19.85■□□□□ 0.77
SHKBP1-228ENST00000602239 VEZTQ9HBM0 779 aa19.85■□□□□ 0.77
SHKBP1-228ENST00000602239 SSC5DA1L4H1 1573 aa19.85■□□□□ 0.77
SHKBP1-228ENST00000602239 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 GRIK5Q16478 980 aa19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 MAP3K11Q16584 847 aa19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 KLHDC4Q8TBB5 520 aa19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 USP44Q9H0E7 712 aa19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 TTF2Q9UNY4 1162 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 IQSEC3Q9UPP2 1182 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-228ENST00000602239 E9PSI1 815 aa19.83■□□□□ 0.77
SHKBP1-228ENST00000602239 RASA3Q14644 834 aa19.83■□□□□ 0.77
SHKBP1-228ENST00000602239 FBXO33Q7Z6M2 555 aa19.83■□□□□ 0.77
SHKBP1-228ENST00000602239 CDCA7LQ96GN5 454 aa19.83■□□□□ 0.77
SHKBP1-228ENST00000602239 PPP2R3BQ9Y5P8 575 aa19.83■□□□□ 0.77
SHKBP1-228ENST00000602239 MROH5Q6ZUA9 1318 aa19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 COL1A1P02452 1464 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 GPR25O00155 361 aa19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 PPP1R12BO60237 982 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 USP2O75604 605 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 SREBF2Q12772 1141 aa19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 SUPT20HL1Q3ZLR7 823 aa19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 TDRD3Q9H7E2 651 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 ZNF70Q9UC06 446 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-228ENST00000602239 PTPRCP08575 1304 aa19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 TNRC18O15417 2968 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 SOX10P56693 466 aa19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 VGLL2Q8N8G2 317 aa19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 SERPINA10Q9UK55 444 aa19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 ECM29Q5VYK3 1845 aa19.81■□□□□ 0.76
SHKBP1-228ENST00000602239 SPDYE2Q495Y8 402 aa19.8■□□□□ 0.76
SHKBP1-228ENST00000602239 CDAN1Q8IWY9 1227 aa19.8■□□□□ 0.76
SHKBP1-228ENST00000602239 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-228ENST00000602239 WNK4Q96J92 1243 aa19.8■□□□□ 0.76
SHKBP1-228ENST00000602239 PDE8BO95263 885 aa19.79■□□□□ 0.76
SHKBP1-228ENST00000602239 GJA5P36382 358 aa19.79■□□□□ 0.76
SHKBP1-228ENST00000602239 BCAMP50895 628 aa19.79■□□□□ 0.76
SHKBP1-228ENST00000602239 CHAF1AQ13111 956 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-228ENST00000602239 VPS37DQ86XT2 251 aa19.79■□□□□ 0.76
SHKBP1-228ENST00000602239 HPS5Q9UPZ3 1129 aa19.79■□□□□ 0.76
SHKBP1-228ENST00000602239 CRKP46108 304 aa19.78■□□□□ 0.76
SHKBP1-228ENST00000602239 NOM1Q5C9Z4 860 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-228ENST00000602239 IFNL1Q8IU54 200 aa19.78■□□□□ 0.76
SHKBP1-228ENST00000602239 TEPSINQ96N21 525 aa19.78■□□□□ 0.76
SHKBP1-228ENST00000602239 CFHR5Q9BXR6 569 aa19.78■□□□□ 0.76
SHKBP1-228ENST00000602239 MANSC4A6NHS7 340 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-228ENST00000602239 TCP10L2B9ZVM9 353 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms