RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 KIAA0825Q8IV33 1275 aa17.6■□□□□ 0.41
LIG1-218ENST00000599322 MEIS3Q99687 375 aa17.6■□□□□ 0.41
LIG1-218ENST00000599322 GGA3Q9NZ52 723 aa17.6■□□□□ 0.41
LIG1-218ENST00000599322 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
LIG1-218ENST00000599322 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
LIG1-218ENST00000599322 SASH1O94885 1247 aa17.59■□□□□ 0.41
LIG1-218ENST00000599322 SLC5A1P13866 664 aa17.59■□□□□ 0.41
LIG1-218ENST00000599322 FKBP1AP62942 108 aaKnown RBP17.59■□□□□ 0.41
LIG1-218ENST00000599322 GRM1Q13255 1194 aa17.59■□□□□ 0.41
LIG1-218ENST00000599322 C2orf69Q8N8R5 385 aa17.59■□□□□ 0.41
LIG1-218ENST00000599322 KLHDC4Q8TBB5 520 aa17.59■□□□□ 0.41
LIG1-218ENST00000599322 MYO1BO43795 1136 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 CIAO1O76071 339 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 GYG1P46976 350 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 DLGAP5Q15398 846 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 ANGEL2Q5VTE6 544 aaKnown RBP17.58■□□□□ 0.4
LIG1-218ENST00000599322 SAPCD2Q86UD0 394 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.4
LIG1-218ENST00000599322 MXD3Q9BW11 206 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 SIL1Q9H173 461 aa17.58■□□□□ 0.4
LIG1-218ENST00000599322 PITPNM2Q9BZ72 1349 aa17.57■□□□□ 0.4
LIG1-218ENST00000599322 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
LIG1-218ENST00000599322 AOC2O75106 756 aa17.57■□□□□ 0.4
LIG1-218ENST00000599322 EGFRP00533 1210 aa17.57■□□□□ 0.4
LIG1-218ENST00000599322 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
LIG1-218ENST00000599322 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
LIG1-218ENST00000599322 LPIN2Q92539 896 aa17.57■□□□□ 0.4
LIG1-218ENST00000599322 FAM84BQ96KN1 310 aaPredicted RBP17.57■□□□□ 0.4
LIG1-218ENST00000599322 GNL3LQ9NVN8 582 aaKnown RBP17.57■□□□□ 0.4
LIG1-218ENST00000599322 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
LIG1-218ENST00000599322 NF2P35240 595 aa17.56■□□□□ 0.4
LIG1-218ENST00000599322 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
LIG1-218ENST00000599322 TDRD7Q8NHU6 1098 aaKnown RBP17.56■□□□□ 0.4
LIG1-218ENST00000599322 TBC1D22AQ8WUA7 517 aa17.56■□□□□ 0.4
LIG1-218ENST00000599322 FAM205AQ6ZU69 1335 aa17.55■□□□□ 0.4
LIG1-218ENST00000599322 F8W031 263 aaPredicted RBP17.55■□□□□ 0.4
LIG1-218ENST00000599322 RFX5P48382 616 aaPredicted RBP17.55■□□□□ 0.4
LIG1-218ENST00000599322 DLK2Q6UY11 383 aa17.55■□□□□ 0.4
LIG1-218ENST00000599322 APOBEC3FQ8IUX4 373 aaKnown RBP17.55■□□□□ 0.4
LIG1-218ENST00000599322 ITPRIPQ8IWB1 547 aa17.55■□□□□ 0.4
LIG1-218ENST00000599322 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
LIG1-218ENST00000599322 BEGAINQ9BUH8 593 aa17.55■□□□□ 0.4
LIG1-218ENST00000599322 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
LIG1-218ENST00000599322 IRS2Q9Y4H2 1338 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 ADM5C9JUS6 153 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
LIG1-218ENST00000599322 ATP2B3Q16720 1220 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 FBXO33Q7Z6M2 555 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 GBA2Q9HCG7 927 aaPredicted RBP17.54■□□□□ 0.4
LIG1-218ENST00000599322 AKAP2Q9Y2D5 859 aa17.54■□□□□ 0.4
LIG1-218ENST00000599322 WNT10BO00744 389 aa17.53■□□□□ 0.4
LIG1-218ENST00000599322 MAP2K2P36507 400 aa17.53■□□□□ 0.4
LIG1-218ENST00000599322 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
LIG1-218ENST00000599322 NBPF9Q3BBW0 867 aa17.53■□□□□ 0.4
LIG1-218ENST00000599322 VGLL2Q8N8G2 317 aa17.53■□□□□ 0.4
LIG1-218ENST00000599322 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
LIG1-218ENST00000599322 TSKSQ9UJT2 592 aa17.53■□□□□ 0.4
LIG1-218ENST00000599322 JAG2Q9Y219 1238 aa17.53■□□□□ 0.4
LIG1-218ENST00000599322 HUNKP57058 714 aa17.52■□□□□ 0.4
LIG1-218ENST00000599322 MTX1Q13505 466 aa17.52■□□□□ 0.4
LIG1-218ENST00000599322 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.4
LIG1-218ENST00000599322 CDCA5Q96FF9 252 aa17.52■□□□□ 0.4
LIG1-218ENST00000599322 ABHD8Q96I13 439 aa17.52■□□□□ 0.4
LIG1-218ENST00000599322 TTF2Q9UNY4 1162 aaKnown RBP17.52■□□□□ 0.4
LIG1-218ENST00000599322 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.4
LIG1-218ENST00000599322 BCAMP50895 628 aa17.51■□□□□ 0.39
LIG1-218ENST00000599322 FKBP1BP68106 108 aa17.51■□□□□ 0.39
LIG1-218ENST00000599322 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
LIG1-218ENST00000599322 TTLL12Q14166 644 aaPredicted RBP17.51■□□□□ 0.39
LIG1-218ENST00000599322 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
LIG1-218ENST00000599322 ATG9AQ7Z3C6 839 aa17.51■□□□□ 0.39
LIG1-218ENST00000599322 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
LIG1-218ENST00000599322 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
LIG1-218ENST00000599322 IQSEC3Q9UPP2 1182 aaPredicted RBP17.51■□□□□ 0.39
LIG1-218ENST00000599322 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
LIG1-218ENST00000599322 MAST3O60307 1309 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 ASTN2O75129 1339 aaPredicted RBP17.5■□□□□ 0.39
LIG1-218ENST00000599322 FGFR2P21802 821 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 CERS5Q8N5B7 392 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 ZIC5Q96T25 663 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 SERPINA10Q9UK55 444 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
LIG1-218ENST00000599322 CCDC102AQ96A19 550 aa17.49■□□□□ 0.39
LIG1-218ENST00000599322 SUGT1Q9Y2Z0 365 aa17.49■□□□□ 0.39
LIG1-218ENST00000599322 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
LIG1-218ENST00000599322 TNFAIP1Q13829 316 aa17.48■□□□□ 0.39
LIG1-218ENST00000599322 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
LIG1-218ENST00000599322 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
LIG1-218ENST00000599322 SPDYE2BA6NHP3 402 aa17.47■□□□□ 0.39
LIG1-218ENST00000599322 SEMA3EO15041 775 aa17.47■□□□□ 0.39
LIG1-218ENST00000599322 SPDYE6P0CI01 402 aa17.47■□□□□ 0.39
LIG1-218ENST00000599322 TNNI2P48788 182 aa17.47■□□□□ 0.39
LIG1-218ENST00000599322 ZNF157P51786 506 aaPredicted RBP17.47■□□□□ 0.39
LIG1-218ENST00000599322 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
LIG1-218ENST00000599322 NOGQ13253 232 aa17.47■□□□□ 0.39
LIG1-218ENST00000599322 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms