RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 CCDC57Q2TAC2 916 aa20.4■□□□□ 0.86
LIM2-202ENST00000596399 LDHAL6AQ6ZMR3 332 aa20.4■□□□□ 0.86
LIM2-202ENST00000596399 KAZALD1Q96I82 304 aa20.4■□□□□ 0.86
LIM2-202ENST00000596399 PUS3Q9BZE2 481 aaKnown RBP20.4■□□□□ 0.86
LIM2-202ENST00000596399 C9orf78Q9NZ63 289 aaPredicted RBP20.4■□□□□ 0.86
LIM2-202ENST00000596399 CLRN2A0PK11 232 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 NF2P35240 595 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 ZNF804AQ7Z570 1209 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 APOBEC3FQ8IUX4 373 aaKnown RBP20.39■□□□□ 0.85
LIM2-202ENST00000596399 SUCLG2Q96I99 432 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 DEFB129Q9H1M3 183 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 CNNM1Q9NRU3 951 aa20.39■□□□□ 0.85
LIM2-202ENST00000596399 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
LIM2-202ENST00000596399 REM2Q8IYK8 340 aaPredicted RBP20.38■□□□□ 0.85
LIM2-202ENST00000596399 PRMT6Q96LA8 375 aaPredicted RBP20.38■□□□□ 0.85
LIM2-202ENST00000596399 SRCIN1Q9C0H9 1055 aa20.38■□□□□ 0.85
LIM2-202ENST00000596399 ANGEL1Q9UNK9 670 aaKnown RBP20.38■□□□□ 0.85
LIM2-202ENST00000596399 ALDH1L1O75891 902 aa20.37■□□□□ 0.85
LIM2-202ENST00000596399 NBPF7P0C2Y1 421 aaPredicted RBP20.37■□□□□ 0.85
LIM2-202ENST00000596399 MMP14P50281 582 aa20.37■□□□□ 0.85
LIM2-202ENST00000596399 SOX10P56693 466 aa20.37■□□□□ 0.85
LIM2-202ENST00000596399 R3HDMLQ9H3Y0 253 aa20.37■□□□□ 0.85
LIM2-202ENST00000596399 SSC5DA1L4H1 1573 aa20.37■□□□□ 0.85
LIM2-202ENST00000596399 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
LIM2-202ENST00000596399 GYG1P46976 350 aa20.36■□□□□ 0.85
LIM2-202ENST00000596399 TM4SF4P48230 202 aa20.36■□□□□ 0.85
LIM2-202ENST00000596399 LDLRAD1Q5T700 205 aa20.36■□□□□ 0.85
LIM2-202ENST00000596399 ARMC9Q7Z3E5 817 aa20.36■□□□□ 0.85
LIM2-202ENST00000596399 CTU1Q7Z7A3 348 aaKnown RBP20.36■□□□□ 0.85
LIM2-202ENST00000596399 MTMR14Q8NCE2 650 aa20.36■□□□□ 0.85
LIM2-202ENST00000596399 ZNF296Q8WUU4 475 aaPredicted RBP20.36■□□□□ 0.85
LIM2-202ENST00000596399 ZNF521Q96K83 1311 aa20.35■□□□□ 0.85
LIM2-202ENST00000596399 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
LIM2-202ENST00000596399 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
LIM2-202ENST00000596399 CLMNQ96JQ2 1002 aa20.35■□□□□ 0.85
LIM2-202ENST00000596399 VEZTQ9HBM0 779 aa20.35■□□□□ 0.85
LIM2-202ENST00000596399 RBM5P52756 815 aaKnown RBP eCLIP20.34■□□□□ 0.85
LIM2-202ENST00000596399 SPRYD7Q5W111 196 aa20.34■□□□□ 0.85
LIM2-202ENST00000596399 NBPF12Q5TAG4 269 aaPredicted RBP20.33■□□□□ 0.85
LIM2-202ENST00000596399 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
LIM2-202ENST00000596399 FAM84BQ96KN1 310 aaPredicted RBP20.33■□□□□ 0.85
LIM2-202ENST00000596399 BICC1Q9H694 974 aaKnown RBP20.33■□□□□ 0.85
LIM2-202ENST00000596399 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
LIM2-202ENST00000596399 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
LIM2-202ENST00000596399 RIPOR2Q9Y4F9 1068 aa20.32■□□□□ 0.84
LIM2-202ENST00000596399 FAM205AQ6ZU69 1335 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 GPR25O00155 361 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 UBE4AQ14139 1066 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 GRIK5Q16478 980 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 LRRC24Q50LG9 513 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 MFSD14BQ5SR56 506 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 KLHDC4Q8TBB5 520 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 SLC10A4Q96EP9 437 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 IQSEC3Q9UPP2 1182 aaPredicted RBP20.31■□□□□ 0.84
LIM2-202ENST00000596399 HPS5Q9UPZ3 1129 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 ECM29Q5VYK3 1845 aa20.31■□□□□ 0.84
LIM2-202ENST00000596399 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
LIM2-202ENST00000596399 UTYO14607 1347 aa20.3■□□□□ 0.84
LIM2-202ENST00000596399 MYO1BO43795 1136 aa20.3■□□□□ 0.84
LIM2-202ENST00000596399 HIBADHP31937 336 aaKnown RBP20.3■□□□□ 0.84
LIM2-202ENST00000596399 SREBF2Q12772 1141 aa20.3■□□□□ 0.84
LIM2-202ENST00000596399 RASA3Q14644 834 aa20.3■□□□□ 0.84
LIM2-202ENST00000596399 CDAN1Q8IWY9 1227 aa20.3■□□□□ 0.84
LIM2-202ENST00000596399 TTF2Q9UNY4 1162 aaKnown RBP20.3■□□□□ 0.84
LIM2-202ENST00000596399 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
LIM2-202ENST00000596399 TDRD3Q9H7E2 651 aaKnown RBP20.29■□□□□ 0.84
LIM2-202ENST00000596399 PPP1R12BO60237 982 aaPredicted RBP20.28■□□□□ 0.84
LIM2-202ENST00000596399 USP2O75604 605 aaPredicted RBP20.28■□□□□ 0.84
LIM2-202ENST00000596399 SSH1Q8WYL5 1049 aa20.28■□□□□ 0.84
LIM2-202ENST00000596399 WNK4Q96J92 1243 aa20.28■□□□□ 0.84
LIM2-202ENST00000596399 ZNF70Q9UC06 446 aaPredicted RBP20.28■□□□□ 0.84
LIM2-202ENST00000596399 PPP2R3BQ9Y5P8 575 aa20.28■□□□□ 0.84
LIM2-202ENST00000596399 GJA5P36382 358 aa20.27■□□□□ 0.84
LIM2-202ENST00000596399 CHAF1AQ13111 956 aaPredicted RBP20.27■□□□□ 0.84
LIM2-202ENST00000596399 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
LIM2-202ENST00000596399 SUPT20HL1Q3ZLR7 823 aa20.27■□□□□ 0.84
LIM2-202ENST00000596399 IGF2BP3O00425 579 aaKnown RBP eCLIP20.26■□□□□ 0.83
LIM2-202ENST00000596399 SPDYE2Q495Y8 402 aa20.26■□□□□ 0.83
LIM2-202ENST00000596399 METTL24Q5JXM2 366 aa20.26■□□□□ 0.83
LIM2-202ENST00000596399 FBXO33Q7Z6M2 555 aa20.26■□□□□ 0.83
LIM2-202ENST00000596399 IFNL1Q8IU54 200 aa20.26■□□□□ 0.83
LIM2-202ENST00000596399 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
LIM2-202ENST00000596399 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
LIM2-202ENST00000596399 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
LIM2-202ENST00000596399 TCP10L2B9ZVM9 353 aa20.25■□□□□ 0.83
LIM2-202ENST00000596399 FKTNO75072 461 aa20.25■□□□□ 0.83
LIM2-202ENST00000596399 VGLL2Q8N8G2 317 aa20.25■□□□□ 0.83
LIM2-202ENST00000596399 CFHR5Q9BXR6 569 aa20.25■□□□□ 0.83
LIM2-202ENST00000596399 USP44Q9H0E7 712 aa20.25■□□□□ 0.83
LIM2-202ENST00000596399 MANSC4A6NHS7 340 aaPredicted RBP20.24■□□□□ 0.83
LIM2-202ENST00000596399 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
LIM2-202ENST00000596399 CRKP46108 304 aa20.24■□□□□ 0.83
LIM2-202ENST00000596399 BCAMP50895 628 aa20.24■□□□□ 0.83
LIM2-202ENST00000596399 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
LIM2-202ENST00000596399 VPS37DQ86XT2 251 aa20.24■□□□□ 0.83
LIM2-202ENST00000596399 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
LIM2-202ENST00000596399 TEPSINQ96N21 525 aa20.24■□□□□ 0.83
LIM2-202ENST00000596399 TMEM39BQ9GZU3 492 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms