RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MYH13Q9UKX3 1938 aa13.57□□□□□ -0.24
USE1-203ENST00000593597 GRM8O00222 908 aa13.57□□□□□ -0.24
USE1-203ENST00000593597 KCNJ4P48050 445 aa13.57□□□□□ -0.24
USE1-203ENST00000593597 SOX10P56693 466 aa13.57□□□□□ -0.24
USE1-203ENST00000593597 IFIT5Q13325 482 aaKnown RBP13.57□□□□□ -0.24
USE1-203ENST00000593597 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
USE1-203ENST00000593597 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
USE1-203ENST00000593597 PUS3Q9BZE2 481 aaKnown RBP13.57□□□□□ -0.24
USE1-203ENST00000593597 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
USE1-203ENST00000593597 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
USE1-203ENST00000593597 TM4SF4P48230 202 aa13.56□□□□□ -0.24
USE1-203ENST00000593597 TTLL12Q14166 644 aaPredicted RBP13.56□□□□□ -0.24
USE1-203ENST00000593597 CTU1Q7Z7A3 348 aaKnown RBP13.56□□□□□ -0.24
USE1-203ENST00000593597 ZNF296Q8WUU4 475 aaPredicted RBP13.56□□□□□ -0.24
USE1-203ENST00000593597 CLRN2A0PK11 232 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
USE1-203ENST00000593597 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 ANP32CO43423 234 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 MMP14P50281 582 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 GRIK5Q16478 980 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 CFAP100Q494V2 611 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
USE1-203ENST00000593597 CLMNQ96JQ2 1002 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 PRMT6Q96LA8 375 aaPredicted RBP13.55□□□□□ -0.24
USE1-203ENST00000593597 DEFB129Q9H1M3 183 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
USE1-203ENST00000593597 ANGEL1Q9UNK9 670 aaKnown RBP13.55□□□□□ -0.24
USE1-203ENST00000593597 PLIN1O60240 522 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
USE1-203ENST00000593597 GJA5P36382 358 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 FKBP1AP62942 108 aaKnown RBP13.54□□□□□ -0.24
USE1-203ENST00000593597 DLGAP5Q15398 846 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 SPRYD7Q5W111 196 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 ANKRD44Q8N8A2 993 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 HPS5Q9UPZ3 1129 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 BRCA2P51587 3418 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 UTYO14607 1347 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
USE1-203ENST00000593597 ZSWIM8A7E2V4 1837 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 ALDH1L1O75891 902 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 SLC34A2O95436 690 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 NF2P35240 595 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 GYG1P46976 350 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 NBPF12Q5TAG4 269 aaPredicted RBP13.53□□□□□ -0.24
USE1-203ENST00000593597 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
USE1-203ENST00000593597 CFHR5Q9BXR6 569 aa13.53□□□□□ -0.24
USE1-203ENST00000593597 MKI67P46013 3256 aaKnown RBP13.53□□□□□ -0.24
USE1-203ENST00000593597 RBBP6Q7Z6E9 1792 aaKnown RBP13.53□□□□□ -0.24
USE1-203ENST00000593597 GPR25O00155 361 aa13.52□□□□□ -0.25
USE1-203ENST00000593597 IGF2BP3O00425 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
USE1-203ENST00000593597 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
USE1-203ENST00000593597 ARMC9Q7Z3E5 817 aa13.52□□□□□ -0.25
USE1-203ENST00000593597 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.25
USE1-203ENST00000593597 FAM84BQ96KN1 310 aaPredicted RBP13.52□□□□□ -0.25
USE1-203ENST00000593597 SRCIN1Q9C0H9 1055 aa13.52□□□□□ -0.25
USE1-203ENST00000593597 RIPOR2Q9Y4F9 1068 aa13.52□□□□□ -0.25
USE1-203ENST00000593597 CAP1Q01518 475 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 RABL6Q3YEC7 729 aaPredicted RBP13.51□□□□□ -0.25
USE1-203ENST00000593597 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
USE1-203ENST00000593597 VGLL2Q8N8G2 317 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 BICC1Q9H694 974 aaKnown RBP13.51□□□□□ -0.25
USE1-203ENST00000593597 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 C9orf78Q9NZ63 289 aaPredicted RBP13.51□□□□□ -0.25
USE1-203ENST00000593597 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
USE1-203ENST00000593597 USP2O75604 605 aaPredicted RBP13.5□□□□□ -0.25
USE1-203ENST00000593597 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
USE1-203ENST00000593597 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
USE1-203ENST00000593597 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
USE1-203ENST00000593597 VEZTQ9HBM0 779 aa13.5□□□□□ -0.25
USE1-203ENST00000593597 SREBF2Q12772 1141 aa13.49□□□□□ -0.25
USE1-203ENST00000593597 RASA3Q14644 834 aa13.49□□□□□ -0.25
USE1-203ENST00000593597 MFSD14BQ5SR56 506 aa13.49□□□□□ -0.25
USE1-203ENST00000593597 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
USE1-203ENST00000593597 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
USE1-203ENST00000593597 TDRD3Q9H7E2 651 aaKnown RBP13.49□□□□□ -0.25
USE1-203ENST00000593597 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
USE1-203ENST00000593597 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
USE1-203ENST00000593597 IQSEC3Q9UPP2 1182 aaPredicted RBP13.49□□□□□ -0.25
USE1-203ENST00000593597 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
USE1-203ENST00000593597 FBXO33Q7Z6M2 555 aa13.48□□□□□ -0.25
USE1-203ENST00000593597 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
USE1-203ENST00000593597 SSH1Q8WYL5 1049 aa13.48□□□□□ -0.25
USE1-203ENST00000593597 PTPN18Q99952 460 aa13.48□□□□□ -0.25
USE1-203ENST00000593597 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
USE1-203ENST00000593597 FKTNO75072 461 aa13.47□□□□□ -0.25
USE1-203ENST00000593597 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
USE1-203ENST00000593597 SLC10A4Q96EP9 437 aa13.47□□□□□ -0.25
USE1-203ENST00000593597 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
USE1-203ENST00000593597 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.25
USE1-203ENST00000593597 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms