RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DLGAP5Q15398 846 aa20.79■□□□□ 0.92
LIG1-205ENST00000593425 ARMC9Q7Z3E5 817 aa20.79■□□□□ 0.92
LIG1-205ENST00000593425 ANGEL1Q9UNK9 670 aaKnown RBP20.79■□□□□ 0.92
LIG1-205ENST00000593425 JAG2Q9Y219 1238 aa20.79■□□□□ 0.92
LIG1-205ENST00000593425 F8W031 263 aaPredicted RBP20.78■□□□□ 0.92
LIG1-205ENST00000593425 SLC34A2O95436 690 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 LDLRAD1Q5T700 205 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 ZNF804AQ7Z570 1209 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 MTMR14Q8NCE2 650 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 DEFB129Q9H1M3 183 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 ARAP2Q8WZ64 1704 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 AOX1Q06278 1338 aa20.78■□□□□ 0.92
LIG1-205ENST00000593425 GRM8O00222 908 aa20.77■□□□□ 0.92
LIG1-205ENST00000593425 HPS5Q9UPZ3 1129 aa20.77■□□□□ 0.92
LIG1-205ENST00000593425 CLRN2A0PK11 232 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 GPR25O00155 361 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 ANP32CO43423 234 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 PLIN1O60240 522 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 SREBF2Q12772 1141 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 CFAP100Q494V2 611 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 SPRYD7Q5W111 196 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 R3HDMLQ9H3Y0 253 aa20.76■□□□□ 0.91
LIG1-205ENST00000593425 FKBP1AP62942 108 aaKnown RBP20.75■□□□□ 0.91
LIG1-205ENST00000593425 CCDC57Q2TAC2 916 aa20.75■□□□□ 0.91
LIG1-205ENST00000593425 LDHAL6AQ6ZMR3 332 aa20.75■□□□□ 0.91
LIG1-205ENST00000593425 TNRC18O15417 2968 aaPredicted RBP20.75■□□□□ 0.91
LIG1-205ENST00000593425 OTOFQ9HC10 1997 aa20.74■□□□□ 0.91
LIG1-205ENST00000593425 SPDYE2BA6NHP3 402 aa20.74■□□□□ 0.91
LIG1-205ENST00000593425 SPDYE6P0CI01 402 aa20.74■□□□□ 0.91
LIG1-205ENST00000593425 MAP3K11Q16584 847 aa20.74■□□□□ 0.91
LIG1-205ENST00000593425 NOM1Q5C9Z4 860 aaKnown RBP20.74■□□□□ 0.91
LIG1-205ENST00000593425 TAF7LQ5H9L4 462 aa20.74■□□□□ 0.91
LIG1-205ENST00000593425 PRMT6Q96LA8 375 aaPredicted RBP20.74■□□□□ 0.91
LIG1-205ENST00000593425 CNNM1Q9NRU3 951 aa20.74■□□□□ 0.91
LIG1-205ENST00000593425 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.74■□□□□ 0.91
LIG1-205ENST00000593425 SLC4A10Q6U841 1118 aa20.73■□□□□ 0.91
LIG1-205ENST00000593425 CLMNQ96JQ2 1002 aa20.73■□□□□ 0.91
LIG1-205ENST00000593425 CFHR5Q9BXR6 569 aa20.73■□□□□ 0.91
LIG1-205ENST00000593425 VEZTQ9HBM0 779 aa20.73■□□□□ 0.91
LIG1-205ENST00000593425 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
LIG1-205ENST00000593425 PPP2R3BQ9Y5P8 575 aa20.73■□□□□ 0.91
LIG1-205ENST00000593425 ALDH1L1O75891 902 aa20.72■□□□□ 0.91
LIG1-205ENST00000593425 PKN2Q16513 984 aaKnown RBP20.72■□□□□ 0.91
LIG1-205ENST00000593425 SUCLG2Q96I99 432 aa20.72■□□□□ 0.91
LIG1-205ENST00000593425 MYO1BO43795 1136 aa20.71■□□□□ 0.91
LIG1-205ENST00000593425 NBPF12Q5TAG4 269 aaPredicted RBP20.71■□□□□ 0.91
LIG1-205ENST00000593425 KAZALD1Q96I82 304 aa20.71■□□□□ 0.91
LIG1-205ENST00000593425 WNK4Q96J92 1243 aa20.71■□□□□ 0.91
LIG1-205ENST00000593425 PUS3Q9BZE2 481 aaKnown RBP20.71■□□□□ 0.91
LIG1-205ENST00000593425 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
LIG1-205ENST00000593425 FAM205AQ6ZU69 1335 aa20.71■□□□□ 0.91
LIG1-205ENST00000593425 PPP1R12BO60237 982 aaPredicted RBP20.7■□□□□ 0.9
LIG1-205ENST00000593425 FKTNO75072 461 aa20.7■□□□□ 0.9
LIG1-205ENST00000593425 GYG1P46976 350 aa20.7■□□□□ 0.9
LIG1-205ENST00000593425 RBM5P52756 815 aaKnown RBP eCLIP20.7■□□□□ 0.9
LIG1-205ENST00000593425 FAM9BQ8IZU0 186 aa20.7■□□□□ 0.9
LIG1-205ENST00000593425 TDRD7Q8NHU6 1098 aaKnown RBP20.7■□□□□ 0.9
LIG1-205ENST00000593425 SLC10A4Q96EP9 437 aa20.7■□□□□ 0.9
LIG1-205ENST00000593425 MANSC4A6NHS7 340 aaPredicted RBP20.69■□□□□ 0.9
LIG1-205ENST00000593425 NBPF7P0C2Y1 421 aaPredicted RBP20.69■□□□□ 0.9
LIG1-205ENST00000593425 UBE4AQ14139 1066 aa20.69■□□□□ 0.9
LIG1-205ENST00000593425 FBXO46Q6PJ61 603 aaPredicted RBP20.69■□□□□ 0.9
LIG1-205ENST00000593425 IFNL1Q8IU54 200 aa20.69■□□□□ 0.9
LIG1-205ENST00000593425 IGF2BP3O00425 579 aaKnown RBP eCLIP20.68■□□□□ 0.9
LIG1-205ENST00000593425 ZBTB48P10074 688 aaPredicted RBP20.68■□□□□ 0.9
LIG1-205ENST00000593425 RASA3Q14644 834 aa20.68■□□□□ 0.9
LIG1-205ENST00000593425 SUPT20HL1Q3ZLR7 823 aa20.68■□□□□ 0.9
LIG1-205ENST00000593425 MFSD14BQ5SR56 506 aa20.68■□□□□ 0.9
LIG1-205ENST00000593425 FAM84BQ96KN1 310 aaPredicted RBP20.68■□□□□ 0.9
LIG1-205ENST00000593425 USP2O75604 605 aaPredicted RBP20.67■□□□□ 0.9
LIG1-205ENST00000593425 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
LIG1-205ENST00000593425 HIBADHP31937 336 aaKnown RBP20.67■□□□□ 0.9
LIG1-205ENST00000593425 GJA5P36382 358 aa20.67■□□□□ 0.9
LIG1-205ENST00000593425 TTF2Q9UNY4 1162 aaKnown RBP20.67■□□□□ 0.9
LIG1-205ENST00000593425 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
LIG1-205ENST00000593425 SPDYE2Q495Y8 402 aa20.66■□□□□ 0.9
LIG1-205ENST00000593425 CDAN1Q8IWY9 1227 aa20.66■□□□□ 0.9
LIG1-205ENST00000593425 ZNF70Q9UC06 446 aaPredicted RBP20.66■□□□□ 0.9
LIG1-205ENST00000593425 RIPOR2Q9Y4F9 1068 aa20.66■□□□□ 0.9
LIG1-205ENST00000593425 UTYO14607 1347 aa20.66■□□□□ 0.9
LIG1-205ENST00000593425 ZNF521Q96K83 1311 aa20.65■□□□□ 0.9
LIG1-205ENST00000593425 IREB2P48200 963 aaKnown RBP20.65■□□□□ 0.9
LIG1-205ENST00000593425 INHBEP58166 350 aa20.65■□□□□ 0.9
LIG1-205ENST00000593425 BICC1Q9H694 974 aaKnown RBP20.65■□□□□ 0.9
LIG1-205ENST00000593425 TDRD3Q9H7E2 651 aaKnown RBP20.65■□□□□ 0.9
LIG1-205ENST00000593425 SERPINA10Q9UK55 444 aa20.65■□□□□ 0.9
LIG1-205ENST00000593425 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
LIG1-205ENST00000593425 GRIK5Q16478 980 aa20.64■□□□□ 0.89
LIG1-205ENST00000593425 RABL6Q3YEC7 729 aaPredicted RBP20.64■□□□□ 0.89
LIG1-205ENST00000593425 ANKRD13AQ8IZ07 590 aa20.64■□□□□ 0.89
LIG1-205ENST00000593425 MROH5Q6ZUA9 1318 aa20.63■□□□□ 0.89
LIG1-205ENST00000593425 CRKP46108 304 aa20.63■□□□□ 0.89
LIG1-205ENST00000593425 TNFAIP1Q13829 316 aa20.63■□□□□ 0.89
LIG1-205ENST00000593425 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
LIG1-205ENST00000593425 DZIP1LQ8IYY4 767 aaKnown RBP20.63■□□□□ 0.89
LIG1-205ENST00000593425 ANKRD44Q8N8A2 993 aa20.63■□□□□ 0.89
LIG1-205ENST00000593425 TEPSINQ96N21 525 aa20.63■□□□□ 0.89
LIG1-205ENST00000593425 IQSEC3Q9UPP2 1182 aaPredicted RBP20.63■□□□□ 0.89
LIG1-205ENST00000593425 MRPL50Q8N5N7 158 aaKnown RBP20.62■□□□□ 0.89
LIG1-205ENST00000593425 ELP3Q9H9T3 547 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms