RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 ASAP3Q8TDY4 903 aa9.61□□□□□ -0.87
VMP1-215ENST00000592619 ZNF296Q8WUU4 475 aaPredicted RBP9.61□□□□□ -0.87
VMP1-215ENST00000592619 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
VMP1-215ENST00000592619 IGFLR1Q9H665 355 aa9.61□□□□□ -0.87
VMP1-215ENST00000592619 GREM1O60565 184 aa9.6□□□□□ -0.87
VMP1-215ENST00000592619 LMNB2Q03252 620 aa9.6□□□□□ -0.87
VMP1-215ENST00000592619 FAAP100Q0VG06 881 aa9.6□□□□□ -0.87
VMP1-215ENST00000592619 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
VMP1-215ENST00000592619 AGMOQ6ZNB7 445 aa9.6□□□□□ -0.87
VMP1-215ENST00000592619 DNAJC2Q99543 621 aaKnown RBP9.6□□□□□ -0.87
VMP1-215ENST00000592619 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.6□□□□□ -0.876e-8■■■■■ 29.7
VMP1-215ENST00000592619 HIRIP3Q9BW71 556 aaPredicted RBP9.6□□□□□ -0.87
VMP1-215ENST00000592619 NT5C1AQ9BXI3 368 aa9.6□□□□□ -0.87
VMP1-215ENST00000592619 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 ARAFP10398 606 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 EIF2AK2P19525 551 aaKnown RBP9.59□□□□□ -0.87
VMP1-215ENST00000592619 GARTP22102 1010 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 MAP3K11Q16584 847 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 TTBK2Q6IQ55 1244 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 FBXL19Q6PCT2 694 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 FAM35AQ86V20 835 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 EAF1Q96JC9 268 aaPredicted RBP9.59□□□□□ -0.87
VMP1-215ENST00000592619 MDFIQ99750 246 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 MUC3BQ9H195 1237 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 CLEC4MQ9H2X3 399 aaPredicted RBP9.59□□□□□ -0.87
VMP1-215ENST00000592619 TMEM39AQ9NV64 488 aa9.59□□□□□ -0.87
VMP1-215ENST00000592619 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
VMP1-215ENST00000592619 F6X3S4 739 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 MX2P20592 715 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 PCBP4P57723 403 aaKnown RBP9.58□□□□□ -0.88
VMP1-215ENST00000592619 CEP135Q66GS9 1140 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 PLD4Q96BZ4 506 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 LNPKQ9C0E8 428 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 ADAM19Q9H013 955 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 FRRS1LQ9P0K9 344 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 SLC6A14Q9UN76 642 aa9.58□□□□□ -0.88
VMP1-215ENST00000592619 TERTO14746 1132 aaKnown RBP9.57□□□□□ -0.88
VMP1-215ENST00000592619 PF4P02776 101 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 ADH6P28332 368 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 PPP2R3AQ06190 1150 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 TBC1D8BQ0IIM8 1120 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 CAMK2GQ13555 558 aaPredicted RBP9.57□□□□□ -0.88
VMP1-215ENST00000592619 COL9A2Q14055 689 aaPredicted RBP9.57□□□□□ -0.88
VMP1-215ENST00000592619 PERM1Q5SV97 790 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
VMP1-215ENST00000592619 KLF15Q9UIH9 416 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 SOX13Q9UN79 622 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 TLR6Q9Y2C9 796 aa9.57□□□□□ -0.88
VMP1-215ENST00000592619 B3GALT4O96024 378 aa9.56□□□□□ -0.88
VMP1-215ENST00000592619 CPB1P15086 417 aa9.56□□□□□ -0.88
VMP1-215ENST00000592619 PTPRAP18433 802 aa9.56□□□□□ -0.88
VMP1-215ENST00000592619 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
VMP1-215ENST00000592619 TTC9Q92623 222 aa9.56□□□□□ -0.88
VMP1-215ENST00000592619 GPN3Q9UHW5 284 aaPredicted RBP9.56□□□□□ -0.88
VMP1-215ENST00000592619 SAMM50Q9Y512 469 aa9.56□□□□□ -0.88
VMP1-215ENST00000592619 ROBO2Q9HCK4 1378 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 PAGE1O75459 146 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 STK10O94804 968 aaKnown RBP9.55□□□□□ -0.88
VMP1-215ENST00000592619 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
VMP1-215ENST00000592619 ADH7P40394 386 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 MAP2K3P46734 347 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 SOX9P48436 509 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 PCNX4Q63HM2 1172 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 ELMSAN1Q6PJG2 1045 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 VN1R5Q7Z5H4 357 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 TRIM42Q8IWZ5 723 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 CACTIN-AS1Q8N1I8 211 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 STRIP2Q9ULQ0 834 aa9.55□□□□□ -0.88
VMP1-215ENST00000592619 FAM160A1Q05DH4 1040 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 PCDH1Q08174 1060 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 GAS6Q14393 721 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 ZNF423Q2M1K9 1284 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 SNAP47Q5SQN1 464 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 NOP9Q86U38 636 aaKnown RBP9.54□□□□□ -0.88
VMP1-215ENST00000592619 GOLM1Q8NBJ4 401 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 LPIN3Q9BQK8 851 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 NAGPAQ9UK23 515 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 CYP8B1Q9UNU6 501 aa9.54□□□□□ -0.88
VMP1-215ENST00000592619 NSFL1CQ9UNZ2 370 aaKnown RBP9.54□□□□□ -0.88
VMP1-215ENST00000592619 BMP6P22004 513 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 NME2P22392 152 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
VMP1-215ENST00000592619 ADAMTSL4Q6UY14 1074 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 FAM196AQ6ZSG2 479 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 NPAS3Q8IXF0 933 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 SMG9Q9H0W8 520 aaKnown RBP9.53□□□□□ -0.88
VMP1-215ENST00000592619 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 GINM1Q9NU53 330 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 EFR3BQ9Y2G0 817 aa9.53□□□□□ -0.88
VMP1-215ENST00000592619 ELOA3CA0A087WX78 387 aaPredicted RBP9.52□□□□□ -0.89
VMP1-215ENST00000592619 ELOA3DA6NLF2 546 aaPredicted RBP9.52□□□□□ -0.89
VMP1-215ENST00000592619 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
VMP1-215ENST00000592619 ELOA3BQ3SY89 546 aa9.52□□□□□ -0.89
VMP1-215ENST00000592619 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
VMP1-215ENST00000592619 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
VMP1-215ENST00000592619 SLITRK4Q8IW52 837 aa9.52□□□□□ -0.89
VMP1-215ENST00000592619 FAM177A1Q8N128 213 aaPredicted RBP9.52□□□□□ -0.89
VMP1-215ENST00000592619 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
VMP1-215ENST00000592619 LRRC3Q9BY71 257 aa9.52□□□□□ -0.89
VMP1-215ENST00000592619 UBP1Q9NZI7 540 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms