RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PRKG1Q13976 671 aa27.54■■■□□ 2
DDX39A-215ENST00000590696 F8W031 263 aaPredicted RBP27.53■■■□□ 2
DDX39A-215ENST00000590696 ZNF521Q96K83 1311 aa27.52■■■□□ 2
DDX39A-215ENST00000590696 RGS19P49795 217 aa27.52■■■□□ 2
DDX39A-215ENST00000590696 ARMC9Q7Z3E5 817 aa27.52■■■□□ 2
DDX39A-215ENST00000590696 MTMR14Q8NCE2 650 aa27.52■■■□□ 2
DDX39A-215ENST00000590696 SUCLG2Q96I99 432 aa27.52■■■□□ 2
DDX39A-215ENST00000590696 FKBP1AP62942 108 aaKnown RBP27.51■■□□□ 1.99
DDX39A-215ENST00000590696 PTPN12Q05209 780 aaKnown RBP27.51■■□□□ 1.99
DDX39A-215ENST00000590696 JAG2Q9Y219 1238 aa27.51■■□□□ 1.99
DDX39A-215ENST00000590696 PCDHAC2Q9Y5I4 1007 aa27.51■■□□□ 1.99
DDX39A-215ENST00000590696 MKRN3Q13064 507 aaKnown RBP27.5■■□□□ 1.99
DDX39A-215ENST00000590696 KAZALD1Q96I82 304 aa27.5■■□□□ 1.99
DDX39A-215ENST00000590696 DEFB129Q9H1M3 183 aa27.5■■□□□ 1.99
DDX39A-215ENST00000590696 NBPF7P0C2Y1 421 aaPredicted RBP27.49■■□□□ 1.99
DDX39A-215ENST00000590696 MLLT1Q03111 559 aaPredicted RBP27.49■■□□□ 1.99
DDX39A-215ENST00000590696 CFAP100Q494V2 611 aa27.49■■□□□ 1.99
DDX39A-215ENST00000590696 TM4SF4P48230 202 aa27.48■■□□□ 1.99
DDX39A-215ENST00000590696 PUS3Q9BZE2 481 aaKnown RBP27.48■■□□□ 1.99
DDX39A-215ENST00000590696 ANGEL1Q9UNK9 670 aaKnown RBP27.48■■□□□ 1.99
DDX39A-215ENST00000590696 COL1A1P02452 1464 aaPredicted RBP27.48■■□□□ 1.99
DDX39A-215ENST00000590696 UBE4AQ14139 1066 aa27.47■■□□□ 1.99
DDX39A-215ENST00000590696 MRPL50Q8N5N7 158 aaKnown RBP27.47■■□□□ 1.99
DDX39A-215ENST00000590696 FZD1Q9UP38 647 aa27.47■■□□□ 1.99
DDX39A-215ENST00000590696 UTYO14607 1347 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 CLRN2A0PK11 232 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 SPDYE2BA6NHP3 402 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 MYO1BO43795 1136 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 TBC1D8O95759 1140 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 SPDYE6P0CI01 402 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 LDLRAD1Q5T700 205 aa27.46■■□□□ 1.99
DDX39A-215ENST00000590696 PRMT6Q96LA8 375 aaPredicted RBP27.46■■□□□ 1.99
DDX39A-215ENST00000590696 GYG1P46976 350 aa27.45■■□□□ 1.98
DDX39A-215ENST00000590696 RBM5P52756 815 aaKnown RBP eCLIP27.45■■□□□ 1.98
DDX39A-215ENST00000590696 CTU1Q7Z7A3 348 aaKnown RBP27.45■■□□□ 1.98
DDX39A-215ENST00000590696 TDRD7Q8NHU6 1098 aaKnown RBP27.45■■□□□ 1.98
DDX39A-215ENST00000590696 PPP2R3BQ9Y5P8 575 aa27.45■■□□□ 1.98
DDX39A-215ENST00000590696 FAM205AQ6ZU69 1335 aa27.44■■□□□ 1.98
DDX39A-215ENST00000590696 ECM29Q5VYK3 1845 aa27.44■■□□□ 1.98
DDX39A-215ENST00000590696 HIBADHP31937 336 aaKnown RBP27.44■■□□□ 1.98
DDX39A-215ENST00000590696 FAM84BQ96KN1 310 aaPredicted RBP27.44■■□□□ 1.98
DDX39A-215ENST00000590696 BICC1Q9H694 974 aaKnown RBP27.44■■□□□ 1.98
DDX39A-215ENST00000590696 VEZTQ9HBM0 779 aa27.44■■□□□ 1.98
DDX39A-215ENST00000590696 RIPOR2Q9Y4F9 1068 aa27.44■■□□□ 1.98
DDX39A-215ENST00000590696 SREBF2Q12772 1141 aa27.43■■□□□ 1.98
DDX39A-215ENST00000590696 AOX1Q06278 1338 aa27.42■■□□□ 1.98
DDX39A-215ENST00000590696 RABL6Q3YEC7 729 aaPredicted RBP27.42■■□□□ 1.98
DDX39A-215ENST00000590696 MFSD14BQ5SR56 506 aa27.42■■□□□ 1.98
DDX39A-215ENST00000590696 SPRYD7Q5W111 196 aa27.42■■□□□ 1.98
DDX39A-215ENST00000590696 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.42■■□□□ 1.98
DDX39A-215ENST00000590696 MROH5Q6ZUA9 1318 aa27.41■■□□□ 1.98
DDX39A-215ENST00000590696 E9PSI1 815 aa27.41■■□□□ 1.98
DDX39A-215ENST00000590696 PPP1R12BO60237 982 aaPredicted RBP27.41■■□□□ 1.98
DDX39A-215ENST00000590696 MAP3K11Q16584 847 aa27.41■■□□□ 1.98
DDX39A-215ENST00000590696 ZNF296Q8WUU4 475 aaPredicted RBP27.41■■□□□ 1.98
DDX39A-215ENST00000590696 SLC10A4Q96EP9 437 aa27.41■■□□□ 1.98
DDX39A-215ENST00000590696 PTPRCP08575 1304 aa27.41■■□□□ 1.98
DDX39A-215ENST00000590696 SSC5DA1L4H1 1573 aa27.4■■□□□ 1.98
DDX39A-215ENST00000590696 SUPT20HL1Q3ZLR7 823 aa27.4■■□□□ 1.98
DDX39A-215ENST00000590696 ANKRD44Q8N8A2 993 aa27.4■■□□□ 1.98
DDX39A-215ENST00000590696 LRRC24Q50LG9 513 aa27.39■■□□□ 1.98
DDX39A-215ENST00000590696 NBPF12Q5TAG4 269 aaPredicted RBP27.39■■□□□ 1.98
DDX39A-215ENST00000590696 SSH1Q8WYL5 1049 aa27.39■■□□□ 1.98
DDX39A-215ENST00000590696 TTF2Q9UNY4 1162 aaKnown RBP27.39■■□□□ 1.98
DDX39A-215ENST00000590696 GPR25O00155 361 aa27.38■■□□□ 1.97
DDX39A-215ENST00000590696 RASA3Q14644 834 aa27.38■■□□□ 1.97
DDX39A-215ENST00000590696 METTL24Q5JXM2 366 aa27.37■■□□□ 1.97
DDX39A-215ENST00000590696 CLMNQ96JQ2 1002 aa27.37■■□□□ 1.97
DDX39A-215ENST00000590696 SERPINA10Q9UK55 444 aa27.37■■□□□ 1.97
DDX39A-215ENST00000590696 SLFN5Q08AF3 891 aa27.36■■□□□ 1.97
DDX39A-215ENST00000590696 NOM1Q5C9Z4 860 aaKnown RBP27.36■■□□□ 1.97
DDX39A-215ENST00000590696 FBXO33Q7Z6M2 555 aa27.36■■□□□ 1.97
DDX39A-215ENST00000590696 VPS37DQ86XT2 251 aa27.36■■□□□ 1.97
DDX39A-215ENST00000590696 TDRD3Q9H7E2 651 aaKnown RBP27.36■■□□□ 1.97
DDX39A-215ENST00000590696 ZNF70Q9UC06 446 aaPredicted RBP27.36■■□□□ 1.97
DDX39A-215ENST00000590696 IQSEC3Q9UPP2 1182 aaPredicted RBP27.36■■□□□ 1.97
DDX39A-215ENST00000590696 MANSC4A6NHS7 340 aaPredicted RBP27.35■■□□□ 1.97
DDX39A-215ENST00000590696 SOX10P56693 466 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 SPDYE2Q495Y8 402 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 KLHDC4Q8TBB5 520 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 WNK4Q96J92 1243 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 CFHR5Q9BXR6 569 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 USP44Q9H0E7 712 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 R3HDMLQ9H3Y0 253 aa27.35■■□□□ 1.97
DDX39A-215ENST00000590696 UNCXA6NJT0 531 aa27.34■■□□□ 1.97
DDX39A-215ENST00000590696 USP2O75604 605 aaPredicted RBP27.34■■□□□ 1.97
DDX39A-215ENST00000590696 PDE8BO95263 885 aa27.34■■□□□ 1.97
DDX39A-215ENST00000590696 ZBTB48P10074 688 aaPredicted RBP27.34■■□□□ 1.97
DDX39A-215ENST00000590696 IREB2P48200 963 aaKnown RBP27.34■■□□□ 1.97
DDX39A-215ENST00000590696 INHBEP58166 350 aa27.34■■□□□ 1.97
DDX39A-215ENST00000590696 TNFAIP1Q13829 316 aa27.34■■□□□ 1.97
DDX39A-215ENST00000590696 PKN2Q16513 984 aaKnown RBP27.34■■□□□ 1.97
DDX39A-215ENST00000590696 CAVIN4Q5BKX8 364 aa27.34■■□□□ 1.97
DDX39A-215ENST00000590696 DZIP1LQ8IYY4 767 aaKnown RBP27.34■■□□□ 1.97
DDX39A-215ENST00000590696 ALDH1A1P00352 501 aa27.33■■□□□ 1.97
DDX39A-215ENST00000590696 CRKP46108 304 aa27.33■■□□□ 1.97
DDX39A-215ENST00000590696 CHAF1AQ13111 956 aaPredicted RBP27.33■■□□□ 1.97
DDX39A-215ENST00000590696 VGLL2Q8N8G2 317 aa27.33■■□□□ 1.97
DDX39A-215ENST00000590696 HPS5Q9UPZ3 1129 aa27.33■■□□□ 1.97
DDX39A-215ENST00000590696 ARAP2Q8WZ64 1704 aa27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms