RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 KLRK1P26718 216 aa9.56□□□□□ -0.88
NPC1-208ENST00000590301 ZNF157P51786 506 aaPredicted RBP9.56□□□□□ -0.88
NPC1-208ENST00000590301 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
NPC1-208ENST00000590301 HELBQ8NG08 1087 aaPredicted RBP9.56□□□□□ -0.88
NPC1-208ENST00000590301 SUCLG2Q96I99 432 aa9.56□□□□□ -0.88
NPC1-208ENST00000590301 HDAC5Q9UQL6 1122 aa9.56□□□□□ -0.88
NPC1-208ENST00000590301 ASTN2O75129 1339 aaPredicted RBP9.56□□□□□ -0.88
NPC1-208ENST00000590301 FAM155AB1AL88 458 aaPredicted RBP9.55□□□□□ -0.88
NPC1-208ENST00000590301 SASH1O94885 1247 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 SLC10A3P09131 477 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 NBPF7P0C2Y1 421 aaPredicted RBP9.55□□□□□ -0.88
NPC1-208ENST00000590301 DLGAP5Q15398 846 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 NBPF9Q3BBW0 867 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 POTEHQ6S545 545 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 DLK2Q6UY11 383 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
NPC1-208ENST00000590301 KAZALD1Q96I82 304 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 ZBED3Q96IU2 234 aaPredicted RBP9.55□□□□□ -0.88
NPC1-208ENST00000590301 MXD3Q9BW11 206 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 BICC1Q9H694 974 aaKnown RBP9.55□□□□□ -0.88
NPC1-208ENST00000590301 SMC4Q9NTJ3 1288 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 PPP2R3BQ9Y5P8 575 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 FAM205AQ6ZU69 1335 aa9.55□□□□□ -0.88
NPC1-208ENST00000590301 COL1A1P02452 1464 aaPredicted RBP9.54□□□□□ -0.88
NPC1-208ENST00000590301 TAF1P21675 1872 aa9.54□□□□□ -0.88
NPC1-208ENST00000590301 SNAP23O00161 211 aa9.54□□□□□ -0.88
NPC1-208ENST00000590301 MYO1BO43795 1136 aa9.54□□□□□ -0.88
NPC1-208ENST00000590301 PLIN1O60240 522 aa9.54□□□□□ -0.88
NPC1-208ENST00000590301 HIBADHP31937 336 aaKnown RBP9.54□□□□□ -0.88
NPC1-208ENST00000590301 ZNF594Q96JF6 807 aaPredicted RBP9.54□□□□□ -0.88
NPC1-208ENST00000590301 RIPOR2Q9Y4F9 1068 aa9.54□□□□□ -0.88
NPC1-208ENST00000590301 KIF16BQ96L93 1317 aa9.54□□□□□ -0.88
NPC1-208ENST00000590301 UNCXA6NJT0 531 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 KIF23Q02241 960 aaPredicted RBP9.53□□□□□ -0.88
NPC1-208ENST00000590301 CAVIN4Q5BKX8 364 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 RASAL3Q86YV0 1011 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 CERS5Q8N5B7 392 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 ANKRD44Q8N8A2 993 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 TDRD7Q8NHU6 1098 aaKnown RBP9.53□□□□□ -0.88
NPC1-208ENST00000590301 API5Q9BZZ5 524 aaKnown RBP9.53□□□□□ -0.88
NPC1-208ENST00000590301 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
NPC1-208ENST00000590301 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 PDE8BO95263 885 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 METTL24Q5JXM2 366 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 ARMC9Q7Z3E5 817 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 VPS37DQ86XT2 251 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 TBC1D22AQ8WUA7 517 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 CDCA7LQ96GN5 454 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 FAM84BQ96KN1 310 aaPredicted RBP9.52□□□□□ -0.89
NPC1-208ENST00000590301 DEFB129Q9H1M3 183 aa9.52□□□□□ -0.89
NPC1-208ENST00000590301 IFIT1P09914 478 aaKnown RBP9.51□□□□□ -0.89
NPC1-208ENST00000590301 TNFAIP1Q13829 316 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
NPC1-208ENST00000590301 PUM3Q15397 648 aaKnown RBP9.51□□□□□ -0.89
NPC1-208ENST00000590301 SUPT20HL1Q3ZLR7 823 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 CFAP100Q494V2 611 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 MFSD14BQ5SR56 506 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 FBXO33Q7Z6M2 555 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 ARHGAP45Q92619 1136 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 ABHD8Q96I13 439 aa9.51□□□□□ -0.89
NPC1-208ENST00000590301 PUS3Q9BZE2 481 aaKnown RBP9.51□□□□□ -0.89
NPC1-208ENST00000590301 PAPPA2Q9BXP8 1791 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 UBE2Q2LH0YL09 131 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 EYA2O00167 538 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
NPC1-208ENST00000590301 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
NPC1-208ENST00000590301 UBTFL1P0CB47 393 aaPredicted RBP9.5□□□□□ -0.89
NPC1-208ENST00000590301 GYG1P46976 350 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 HDLBPQ00341 1268 aaKnown RBP9.5□□□□□ -0.89
NPC1-208ENST00000590301 SREBF2Q12772 1141 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 LDLRAD1Q5T700 205 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 VGLL2Q8N8G2 317 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 CSRNP1Q96S65 589 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 ZIC5Q96T25 663 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 RNF186Q9NXI6 227 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 TSKSQ9UJT2 592 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 SUGT1Q9Y2Z0 365 aa9.5□□□□□ -0.89
NPC1-208ENST00000590301 TRPM7Q96QT4 1865 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 IPO8O15397 1037 aaKnown RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 FRAT2O75474 233 aaPredicted RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 TRPA1O75762 1119 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 CIAO1O76071 339 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 RBM5P52756 815 aaKnown RBP eCLIP9.49□□□□□ -0.89
NPC1-208ENST00000590301 RARSP54136 660 aaKnown RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 LRRC24Q50LG9 513 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 PRAMEF18Q5VWM3 479 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 LPIN2Q92539 896 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 PRMT6Q96LA8 375 aaPredicted RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 MRIQ9BWK5 157 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 NOB1Q9ULX3 412 aaKnown RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
NPC1-208ENST00000590301 MAST3O60307 1309 aa9.49□□□□□ -0.89
NPC1-208ENST00000590301 MYH3P11055 1940 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms