RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-228ENST00000590248 PDE8BO95263 885 aa17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 VGLL2Q8N8G2 317 aa17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 C2orf69Q8N8R5 385 aa17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
NEDD4L-228ENST00000590248 MOB2Q70IA6 237 aa17.2■□□□□ 0.34
NEDD4L-228ENST00000590248 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
NEDD4L-228ENST00000590248 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
NEDD4L-228ENST00000590248 SIL1Q9H173 461 aa17.2■□□□□ 0.34
NEDD4L-228ENST00000590248 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
NEDD4L-228ENST00000590248 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
NEDD4L-228ENST00000590248 THSD7BQ9C0I4 1608 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 EYA2O00167 538 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 LBX1P52954 281 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 MAP2K1Q02750 393 aaPredicted RBP17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 RGMBQ6NW40 437 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 HHIPL1Q96JK4 782 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 MYH13Q9UKX3 1938 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 AOX1Q06278 1338 aa17.19■□□□□ 0.34
NEDD4L-228ENST00000590248 TRIM27P14373 513 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 CTCFP49711 727 aaPredicted RBP17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 BCAMP50895 628 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 DLGAP5Q15398 846 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 ZBED3Q96IU2 234 aaPredicted RBP17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 TSKSQ9UJT2 592 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 FAM205AQ6ZU69 1335 aa17.18■□□□□ 0.34
NEDD4L-228ENST00000590248 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 MAP2K2P36507 400 aa17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 GRIK5Q16478 980 aa17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
NEDD4L-228ENST00000590248 CLRN2A0PK11 232 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 FAM155AB1AL88 458 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 UBE2Q2LH0YL09 131 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 FGFR2P21802 821 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 MMP14P50281 582 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 PRKG1Q13976 671 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 TNS4Q8IZW8 715 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 TTF2Q9UNY4 1162 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 CASP8AP2Q9UKL3 1982 aa17.16■□□□□ 0.34
NEDD4L-228ENST00000590248 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-228ENST00000590248 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
NEDD4L-228ENST00000590248 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
NEDD4L-228ENST00000590248 FZD1Q9UP38 647 aa17.15■□□□□ 0.34
NEDD4L-228ENST00000590248 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
NEDD4L-228ENST00000590248 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
NEDD4L-228ENST00000590248 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 IFIT1P09914 478 aaKnown RBP17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 MTMR14Q8NCE2 650 aa17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 PAPPA2Q9BXP8 1791 aa17.14■□□□□ 0.33
NEDD4L-228ENST00000590248 GNAI3P08754 354 aa17.13■□□□□ 0.33
NEDD4L-228ENST00000590248 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
NEDD4L-228ENST00000590248 NOGQ13253 232 aa17.13■□□□□ 0.33
NEDD4L-228ENST00000590248 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
NEDD4L-228ENST00000590248 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
NEDD4L-228ENST00000590248 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
NEDD4L-228ENST00000590248 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 CAPN15O75808 1086 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 CIAO1O76071 339 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 SLC5A1P13866 664 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 LPIN2Q92539 896 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
NEDD4L-228ENST00000590248 SLC10A3P09131 477 aa17.11■□□□□ 0.33
NEDD4L-228ENST00000590248 TDRD3Q9H7E2 651 aaKnown RBP17.11■□□□□ 0.33
NEDD4L-228ENST00000590248 MYO1BO43795 1136 aa17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 CRKP46108 304 aa17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 FKBP1BP68106 108 aa17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 RASAL3Q86YV0 1011 aa17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-228ENST00000590248 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms