RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SUCLG2Q96I99 432 aa22.64■■□□□ 1.21
PRKCSH-211ENST00000590098 ZBED3Q96IU2 234 aaPredicted RBP22.64■■□□□ 1.21
PRKCSH-211ENST00000590098 E9PSI1 815 aa22.63■■□□□ 1.21
PRKCSH-211ENST00000590098 FKBP1AP62942 108 aaKnown RBP22.63■■□□□ 1.21
PRKCSH-211ENST00000590098 ARMC9Q7Z3E5 817 aa22.63■■□□□ 1.21
PRKCSH-211ENST00000590098 MTMR14Q8NCE2 650 aa22.63■■□□□ 1.21
PRKCSH-211ENST00000590098 ECM29Q5VYK3 1845 aa22.62■■□□□ 1.21
PRKCSH-211ENST00000590098 F8W031 263 aaPredicted RBP22.62■■□□□ 1.21
PRKCSH-211ENST00000590098 MYO1BO43795 1136 aa22.62■■□□□ 1.21
PRKCSH-211ENST00000590098 NBPF7P0C2Y1 421 aaPredicted RBP22.62■■□□□ 1.21
PRKCSH-211ENST00000590098 MRPL50Q8N5N7 158 aaKnown RBP22.62■■□□□ 1.21
PRKCSH-211ENST00000590098 PCDHAC2Q9Y5I4 1007 aa22.62■■□□□ 1.21
PRKCSH-211ENST00000590098 PRKG1Q13976 671 aa22.61■■□□□ 1.21
PRKCSH-211ENST00000590098 UBE4AQ14139 1066 aa22.61■■□□□ 1.21
PRKCSH-211ENST00000590098 KAZALD1Q96I82 304 aa22.61■■□□□ 1.21
PRKCSH-211ENST00000590098 DEFB129Q9H1M3 183 aa22.61■■□□□ 1.21
PRKCSH-211ENST00000590098 JAG2Q9Y219 1238 aa22.61■■□□□ 1.21
PRKCSH-211ENST00000590098 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
PRKCSH-211ENST00000590098 UTYO14607 1347 aa22.6■■□□□ 1.21
PRKCSH-211ENST00000590098 PTPRCP08575 1304 aa22.6■■□□□ 1.21
PRKCSH-211ENST00000590098 RGS19P49795 217 aa22.6■■□□□ 1.21
PRKCSH-211ENST00000590098 CFAP100Q494V2 611 aa22.6■■□□□ 1.21
PRKCSH-211ENST00000590098 HIBADHP31937 336 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-211ENST00000590098 RBM5P52756 815 aaKnown RBP eCLIP22.59■■□□□ 1.21
PRKCSH-211ENST00000590098 PUS3Q9BZE2 481 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-211ENST00000590098 BICC1Q9H694 974 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-211ENST00000590098 ANGEL1Q9UNK9 670 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-211ENST00000590098 FZD1Q9UP38 647 aa22.59■■□□□ 1.21
PRKCSH-211ENST00000590098 MROH5Q6ZUA9 1318 aa22.58■■□□□ 1.21
PRKCSH-211ENST00000590098 GYG1P46976 350 aa22.58■■□□□ 1.21
PRKCSH-211ENST00000590098 PTPN12Q05209 780 aaKnown RBP22.58■■□□□ 1.21
PRKCSH-211ENST00000590098 PPP2R3BQ9Y5P8 575 aa22.58■■□□□ 1.21
PRKCSH-211ENST00000590098 FAM205AQ6ZU69 1335 aa22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 SPDYE2BA6NHP3 402 aa22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 SPDYE6P0CI01 402 aa22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 MKRN3Q13064 507 aaKnown RBP22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 RABL6Q3YEC7 729 aaPredicted RBP22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 TDRD7Q8NHU6 1098 aaKnown RBP22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 SSH1Q8WYL5 1049 aa22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 PRMT6Q96LA8 375 aaPredicted RBP22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 RIPOR2Q9Y4F9 1068 aa22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 AOX1Q06278 1338 aa22.57■■□□□ 1.2
PRKCSH-211ENST00000590098 CLRN2A0PK11 232 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 TM4SF4P48230 202 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 SLFN5Q08AF3 891 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 SREBF2Q12772 1141 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 MFSD14BQ5SR56 506 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 VPS37DQ86XT2 251 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 FAM84BQ96KN1 310 aaPredicted RBP22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 VEZTQ9HBM0 779 aa22.56■■□□□ 1.2
PRKCSH-211ENST00000590098 PPP1R12BO60237 982 aaPredicted RBP22.55■■□□□ 1.2
PRKCSH-211ENST00000590098 SUPT20HL1Q3ZLR7 823 aa22.55■■□□□ 1.2
PRKCSH-211ENST00000590098 METTL24Q5JXM2 366 aa22.55■■□□□ 1.2
PRKCSH-211ENST00000590098 LDLRAD1Q5T700 205 aa22.55■■□□□ 1.2
PRKCSH-211ENST00000590098 TBC1D8O95759 1140 aa22.54■■□□□ 1.2
PRKCSH-211ENST00000590098 MLLT1Q03111 559 aaPredicted RBP22.54■■□□□ 1.2
PRKCSH-211ENST00000590098 CTU1Q7Z7A3 348 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-211ENST00000590098 ANKRD44Q8N8A2 993 aa22.54■■□□□ 1.2
PRKCSH-211ENST00000590098 TTF2Q9UNY4 1162 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-211ENST00000590098 CAVIN4Q5BKX8 364 aa22.53■■□□□ 1.2
PRKCSH-211ENST00000590098 SLC10A4Q96EP9 437 aa22.53■■□□□ 1.2
PRKCSH-211ENST00000590098 SERPINA10Q9UK55 444 aa22.53■■□□□ 1.2
PRKCSH-211ENST00000590098 FRAT2O75474 233 aaPredicted RBP22.52■■□□□ 1.2
PRKCSH-211ENST00000590098 ALDH1L2Q3SY69 923 aa22.52■■□□□ 1.2
PRKCSH-211ENST00000590098 LRRC24Q50LG9 513 aa22.52■■□□□ 1.2
PRKCSH-211ENST00000590098 SPRYD7Q5W111 196 aa22.52■■□□□ 1.2
PRKCSH-211ENST00000590098 USP44Q9H0E7 712 aa22.52■■□□□ 1.2
PRKCSH-211ENST00000590098 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.52■■□□□ 1.2
PRKCSH-211ENST00000590098 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
PRKCSH-211ENST00000590098 MAP3K11Q16584 847 aa22.51■■□□□ 1.19
PRKCSH-211ENST00000590098 SMC4Q9NTJ3 1288 aa22.51■■□□□ 1.19
PRKCSH-211ENST00000590098 UNCXA6NJT0 531 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 PDE8BO95263 885 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 RASA3Q14644 834 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 NBPF12Q5TAG4 269 aaPredicted RBP22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 FBXO33Q7Z6M2 555 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 CDCA7LQ96GN5 454 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 R3HDMLQ9H3Y0 253 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 IQSEC3Q9UPP2 1182 aaPredicted RBP22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 ARAP2Q8WZ64 1704 aa22.5■■□□□ 1.19
PRKCSH-211ENST00000590098 IREB2P48200 963 aaKnown RBP22.49■■□□□ 1.19
PRKCSH-211ENST00000590098 CHAF1AQ13111 956 aaPredicted RBP22.49■■□□□ 1.19
PRKCSH-211ENST00000590098 KLHDC4Q8TBB5 520 aa22.49■■□□□ 1.19
PRKCSH-211ENST00000590098 ZNF296Q8WUU4 475 aaPredicted RBP22.49■■□□□ 1.19
PRKCSH-211ENST00000590098 ZNF70Q9UC06 446 aaPredicted RBP22.49■■□□□ 1.19
PRKCSH-211ENST00000590098 SSC5DA1L4H1 1573 aa22.49■■□□□ 1.19
PRKCSH-211ENST00000590098 MANSC4A6NHS7 340 aaPredicted RBP22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 CRKP46108 304 aa22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 INHBEP58166 350 aa22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 SPDYE2Q495Y8 402 aa22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 DZIP1LQ8IYY4 767 aaKnown RBP22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 TBC1D22AQ8WUA7 517 aa22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 TDRD3Q9H7E2 651 aaKnown RBP22.48■■□□□ 1.19
PRKCSH-211ENST00000590098 GPR25O00155 361 aa22.47■■□□□ 1.19
PRKCSH-211ENST00000590098 ALDH1A1P00352 501 aa22.47■■□□□ 1.19
PRKCSH-211ENST00000590098 ZBTB48P10074 688 aaPredicted RBP22.47■■□□□ 1.19
PRKCSH-211ENST00000590098 PKN2Q16513 984 aaKnown RBP22.47■■□□□ 1.19
PRKCSH-211ENST00000590098 NOM1Q5C9Z4 860 aaKnown RBP22.47■■□□□ 1.19
PRKCSH-211ENST00000590098 VGLL2Q8N8G2 317 aa22.47■■□□□ 1.19
PRKCSH-211ENST00000590098 CLMNQ96JQ2 1002 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms