RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 EAF2Q96CJ1 260 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-216ENST00000584014 CCDC136Q96JN2 1154 aa10.25□□□□□ -0.77
ERBB2-216ENST00000584014 DBNDD2Q9BQY9 259 aa10.25□□□□□ -0.77
ERBB2-216ENST00000584014 DCTPP1Q9H773 170 aa10.25□□□□□ -0.77
ERBB2-216ENST00000584014 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
ERBB2-216ENST00000584014 TLR7Q9NYK1 1049 aaKnown RBP10.25□□□□□ -0.77
ERBB2-216ENST00000584014 ZBTB12Q9Y330 459 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-216ENST00000584014 UTRNP46939 3433 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 USP17L4A6NCW7 530 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 FZD9O00144 591 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 ZBTB22O15209 634 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-216ENST00000584014 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
ERBB2-216ENST00000584014 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 USP17L1Q7RTZ2 530 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 PODNQ7Z5L7 613 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 FBXO33Q7Z6M2 555 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 RRAGCQ9HB90 399 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 KDM2BQ8NHM5 1336 aa10.24□□□□□ -0.77
ERBB2-216ENST00000584014 GLTPD2A6NH11 291 aa10.23□□□□□ -0.77
ERBB2-216ENST00000584014 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-216ENST00000584014 GMPSP49915 693 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-216ENST00000584014 C15orf52Q6ZUT6 534 aaKnown RBP10.23□□□□□ -0.77
ERBB2-216ENST00000584014 C16orf71Q8IYS4 520 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-216ENST00000584014 GCC1Q96CN9 775 aa10.23□□□□□ -0.77
ERBB2-216ENST00000584014 LNPKQ9C0E8 428 aa10.23□□□□□ -0.77
ERBB2-216ENST00000584014 GPBP1L1Q9HC44 474 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-216ENST00000584014 ZNF609O15014 1411 aa10.23□□□□□ -0.77
ERBB2-216ENST00000584014 MYH13Q9UKX3 1938 aa10.23□□□□□ -0.77
ERBB2-216ENST00000584014 RBM5P52756 815 aaKnown RBP eCLIP10.22□□□□□ -0.77
ERBB2-216ENST00000584014 EAPPQ56P03 285 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-216ENST00000584014 KIAA0825Q8IV33 1275 aa10.22□□□□□ -0.77
ERBB2-216ENST00000584014 GPC2Q8N158 579 aa10.22□□□□□ -0.77
ERBB2-216ENST00000584014 TDRD7Q8NHU6 1098 aaKnown RBP10.22□□□□□ -0.77
ERBB2-216ENST00000584014 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
ERBB2-216ENST00000584014 GPR108Q9NPR9 543 aa10.22□□□□□ -0.77
ERBB2-216ENST00000584014 DBNLQ9UJU6 430 aaKnown RBP10.22□□□□□ -0.77
ERBB2-216ENST00000584014 SCN9AQ15858 1988 aa10.22□□□□□ -0.77
ERBB2-216ENST00000584014 SHTN1A0MZ66 631 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 H7C1D1 291 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 IL1R1P14778 569 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 SCNN1DP51172 638 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 TSHZ3Q63HK5 1081 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
ERBB2-216ENST00000584014 PI16Q6UXB8 463 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 DNAJC2Q99543 621 aaKnown RBP10.21□□□□□ -0.77
ERBB2-216ENST00000584014 ABCF2Q9UG63 623 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 CNOT7Q9UIV1 285 aaKnown RBP10.21□□□□□ -0.77
ERBB2-216ENST00000584014 DENND2AQ9ULE3 1009 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 CLEC11AQ9Y240 323 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 NDUFB9Q9Y6M9 179 aa10.21□□□□□ -0.77
ERBB2-216ENST00000584014 IRS2Q9Y4H2 1338 aa10.21□□□□□ -0.78
ERBB2-216ENST00000584014 VIL1P09327 827 aaKnown RBP10.2□□□□□ -0.78
ERBB2-216ENST00000584014 UQCRFS1P1P0C7P4 283 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 EPS15P42566 896 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 RASGRF1Q13972 1273 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 SCARF1Q14162 830 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 STRIP1Q5VSL9 837 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 MICALL2Q8IY33 904 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 SPATA5Q8NB90 893 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 OTUD7AQ8TE49 926 aaPredicted RBP10.2□□□□□ -0.78
ERBB2-216ENST00000584014 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 BOLA2Q9H3K6 86 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 HACL1Q9UJ83 578 aa10.2□□□□□ -0.78
ERBB2-216ENST00000584014 ZC3H4Q9UPT8 1303 aaKnown RBP10.2□□□□□ -0.78
ERBB2-216ENST00000584014 MAP4K4O95819 1239 aaPredicted RBP10.19□□□□□ -0.78
ERBB2-216ENST00000584014 USP17L8P0C7I0 530 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 VEGFAP15692 232 aaPredicted RBP10.19□□□□□ -0.78
ERBB2-216ENST00000584014 MCAMP43121 646 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 TBC1D10BQ4KMP7 808 aaPredicted RBP10.19□□□□□ -0.78
ERBB2-216ENST00000584014 SAMD7Q7Z3H4 446 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 CHD1LQ86WJ1 897 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 ZNF784Q8NCA9 323 aaPredicted RBP10.19□□□□□ -0.78
ERBB2-216ENST00000584014 WDR66Q8TBY9 1149 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 RAI14Q9P0K7 980 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 HMG20BQ9P0W2 317 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 LRP2BPQ9P2M1 347 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 HDAC9Q9UKV0 1011 aa10.19□□□□□ -0.78
ERBB2-216ENST00000584014 TTF2Q9UNY4 1162 aaKnown RBP10.19□□□□□ -0.78
ERBB2-216ENST00000584014 IQCA1LA6NCM1 817 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 EPHX2P34913 555 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 ZAP70P43403 619 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 GRIK5Q16478 980 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 DZIP1Q86YF9 867 aaKnown RBP10.18□□□□□ -0.78
ERBB2-216ENST00000584014 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 TBC1D22AQ8WUA7 517 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 ECHDC1Q9NTX5 307 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 PPP4R2Q9NY27 417 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 GPRC5DQ9NZD1 345 aa10.18□□□□□ -0.78
ERBB2-216ENST00000584014 FAM205AQ6ZU69 1335 aa10.17□□□□□ -0.78
ERBB2-216ENST00000584014 MYO3BQ8WXR4 1341 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms