RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 APOBEC3FQ8IUX4 373 aaKnown RBP19.86■□□□□ 0.77
SKA2-209ENST00000583976 OTOFQ9HC10 1997 aa19.86■□□□□ 0.77
SKA2-209ENST00000583976 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
SKA2-209ENST00000583976 TBC1D8O95759 1140 aa19.85■□□□□ 0.77
SKA2-209ENST00000583976 IFIT5Q13325 482 aaKnown RBP19.85■□□□□ 0.77
SKA2-209ENST00000583976 HDAC9Q9UKV0 1011 aa19.85■□□□□ 0.77
SKA2-209ENST00000583976 PTPN12Q05209 780 aaKnown RBP19.84■□□□□ 0.77
SKA2-209ENST00000583976 LMBR1LQ6UX01 489 aa19.84■□□□□ 0.77
SKA2-209ENST00000583976 CTU1Q7Z7A3 348 aaKnown RBP19.84■□□□□ 0.77
SKA2-209ENST00000583976 LAMB1P07942 1786 aa19.84■□□□□ 0.77
SKA2-209ENST00000583976 CLRN2A0PK11 232 aa19.83■□□□□ 0.77
SKA2-209ENST00000583976 E9PSI1 815 aa19.83■□□□□ 0.77
SKA2-209ENST00000583976 GRM8O00222 908 aa19.83■□□□□ 0.77
SKA2-209ENST00000583976 NF2P35240 595 aa19.83■□□□□ 0.77
SKA2-209ENST00000583976 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
SKA2-209ENST00000583976 C15orf52Q6ZUT6 534 aaKnown RBP19.82■□□□□ 0.76
SKA2-209ENST00000583976 ZNF296Q8WUU4 475 aaPredicted RBP19.82■□□□□ 0.76
SKA2-209ENST00000583976 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.82■□□□□ 0.76
SKA2-209ENST00000583976 ANGEL1Q9UNK9 670 aaKnown RBP19.82■□□□□ 0.76
SKA2-209ENST00000583976 PLIN1O60240 522 aa19.81■□□□□ 0.76
SKA2-209ENST00000583976 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
SKA2-209ENST00000583976 ZNF804AQ7Z570 1209 aa19.81■□□□□ 0.76
SKA2-209ENST00000583976 REM2Q8IYK8 340 aaPredicted RBP19.81■□□□□ 0.76
SKA2-209ENST00000583976 DEFB129Q9H1M3 183 aa19.81■□□□□ 0.76
SKA2-209ENST00000583976 R3HDMLQ9H3Y0 253 aa19.81■□□□□ 0.76
SKA2-209ENST00000583976 PDE4DIPQ5VU43 2346 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 IL1R1P14778 569 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 CFAP100Q494V2 611 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 TAF7LQ5H9L4 462 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 SLC4A10Q6U841 1118 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 ARMC9Q7Z3E5 817 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 SUCLG2Q96I99 432 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 CLMNQ96JQ2 1002 aa19.8■□□□□ 0.76
SKA2-209ENST00000583976 SPDYE2BA6NHP3 402 aa19.79■□□□□ 0.76
SKA2-209ENST00000583976 SPDYE6P0CI01 402 aa19.79■□□□□ 0.76
SKA2-209ENST00000583976 LDLRAD1Q5T700 205 aa19.79■□□□□ 0.76
SKA2-209ENST00000583976 CNNM1Q9NRU3 951 aa19.79■□□□□ 0.76
SKA2-209ENST00000583976 HPS5Q9UPZ3 1129 aa19.79■□□□□ 0.76
SKA2-209ENST00000583976 CENPFP49454 3210 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 CCDC57Q2TAC2 916 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 SPRYD7Q5W111 196 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 LDHAL6AQ6ZMR3 332 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 MTMR14Q8NCE2 650 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 KAZALD1Q96I82 304 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 PUS3Q9BZE2 481 aaKnown RBP19.78■□□□□ 0.76
SKA2-209ENST00000583976 VEZTQ9HBM0 779 aa19.78■□□□□ 0.76
SKA2-209ENST00000583976 GPR25O00155 361 aa19.77■□□□□ 0.76
SKA2-209ENST00000583976 SLC34A2O95436 690 aa19.77■□□□□ 0.76
SKA2-209ENST00000583976 GYG1P46976 350 aa19.77■□□□□ 0.76
SKA2-209ENST00000583976 TM4SF4P48230 202 aa19.77■□□□□ 0.76
SKA2-209ENST00000583976 MMP14P50281 582 aa19.77■□□□□ 0.76
SKA2-209ENST00000583976 PRMT6Q96LA8 375 aaPredicted RBP19.77■□□□□ 0.76
SKA2-209ENST00000583976 SREBF2Q12772 1141 aa19.76■□□□□ 0.75
SKA2-209ENST00000583976 CDAN1Q8IWY9 1227 aa19.76■□□□□ 0.75
SKA2-209ENST00000583976 YTHDC1Q96MU7 727 aaKnown RBP19.76■□□□□ 0.75
SKA2-209ENST00000583976 C9orf78Q9NZ63 289 aaPredicted RBP19.76■□□□□ 0.75
SKA2-209ENST00000583976 BRCA2P51587 3418 aa19.76■□□□□ 0.75
SKA2-209ENST00000583976 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
SKA2-209ENST00000583976 NBPF7P0C2Y1 421 aaPredicted RBP19.75■□□□□ 0.75
SKA2-209ENST00000583976 NBPF12Q5TAG4 269 aaPredicted RBP19.75■□□□□ 0.75
SKA2-209ENST00000583976 TRMT2AQ8IZ69 625 aaKnown RBP19.75■□□□□ 0.75
SKA2-209ENST00000583976 WNK4Q96J92 1243 aa19.75■□□□□ 0.75
SKA2-209ENST00000583976 SRCIN1Q9C0H9 1055 aa19.75■□□□□ 0.75
SKA2-209ENST00000583976 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
SKA2-209ENST00000583976 RBM5P52756 815 aaKnown RBP eCLIP19.74■□□□□ 0.75
SKA2-209ENST00000583976 FKBP1AP62942 108 aaKnown RBP19.74■□□□□ 0.75
SKA2-209ENST00000583976 MKI67P46013 3256 aaKnown RBP19.74■□□□□ 0.75
SKA2-209ENST00000583976 FAM205AQ6ZU69 1335 aa19.74■□□□□ 0.75
SKA2-209ENST00000583976 IGF2BP3O00425 579 aaKnown RBP eCLIP19.73■□□□□ 0.75
SKA2-209ENST00000583976 GJA5P36382 358 aa19.73■□□□□ 0.75
SKA2-209ENST00000583976 GRIK5Q16478 980 aa19.73■□□□□ 0.75
SKA2-209ENST00000583976 MAP3K11Q16584 847 aa19.73■□□□□ 0.75
SKA2-209ENST00000583976 MFSD14BQ5SR56 506 aa19.73■□□□□ 0.75
SKA2-209ENST00000583976 BICC1Q9H694 974 aaKnown RBP19.73■□□□□ 0.75
SKA2-209ENST00000583976 IQSEC3Q9UPP2 1182 aaPredicted RBP19.73■□□□□ 0.75
SKA2-209ENST00000583976 PPP2R3BQ9Y5P8 575 aa19.73■□□□□ 0.75
SKA2-209ENST00000583976 MYO1BO43795 1136 aa19.72■□□□□ 0.75
SKA2-209ENST00000583976 RASA3Q14644 834 aa19.72■□□□□ 0.75
SKA2-209ENST00000583976 TDRD7Q8NHU6 1098 aaKnown RBP19.72■□□□□ 0.75
SKA2-209ENST00000583976 TTF2Q9UNY4 1162 aaKnown RBP19.72■□□□□ 0.75
SKA2-209ENST00000583976 SPDYE2Q495Y8 402 aa19.71■□□□□ 0.75
SKA2-209ENST00000583976 NOM1Q5C9Z4 860 aaKnown RBP19.71■□□□□ 0.75
SKA2-209ENST00000583976 ANKRD44Q8N8A2 993 aa19.71■□□□□ 0.75
SKA2-209ENST00000583976 FAM84BQ96KN1 310 aaPredicted RBP19.71■□□□□ 0.75
SKA2-209ENST00000583976 CFHR5Q9BXR6 569 aa19.71■□□□□ 0.75
SKA2-209ENST00000583976 UTYO14607 1347 aa19.71■□□□□ 0.75
SKA2-209ENST00000583976 PPP1R12BO60237 982 aaPredicted RBP19.7■□□□□ 0.74
SKA2-209ENST00000583976 FKTNO75072 461 aa19.7■□□□□ 0.74
SKA2-209ENST00000583976 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
SKA2-209ENST00000583976 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
SKA2-209ENST00000583976 LRRC24Q50LG9 513 aa19.7■□□□□ 0.74
SKA2-209ENST00000583976 IFNL1Q8IU54 200 aa19.7■□□□□ 0.74
SKA2-209ENST00000583976 KLHDC4Q8TBB5 520 aa19.7■□□□□ 0.74
SKA2-209ENST00000583976 SLC10A4Q96EP9 437 aa19.7■□□□□ 0.74
SKA2-209ENST00000583976 TDRD3Q9H7E2 651 aaKnown RBP19.7■□□□□ 0.74
SKA2-209ENST00000583976 ZNF70Q9UC06 446 aaPredicted RBP19.7■□□□□ 0.74
SKA2-209ENST00000583976 MANSC4A6NHS7 340 aaPredicted RBP19.69■□□□□ 0.74
SKA2-209ENST00000583976 CHAF1AQ13111 956 aaPredicted RBP19.69■□□□□ 0.74
SKA2-209ENST00000583976 RABL6Q3YEC7 729 aaPredicted RBP19.69■□□□□ 0.74
SKA2-209ENST00000583976 FBXO46Q6PJ61 603 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms