RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SULF1Q8IWU6 871 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 KLHDC4Q8TBB5 520 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 GGA3Q9NZ52 723 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
SKA2-208ENST00000583927 LAMB1P07942 1786 aa12.35□□□□□ -0.43
SKA2-208ENST00000583927 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
SKA2-208ENST00000583927 ECE1P42892 770 aa12.35□□□□□ -0.43
SKA2-208ENST00000583927 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
SKA2-208ENST00000583927 CERS5Q8N5B7 392 aa12.35□□□□□ -0.43
SKA2-208ENST00000583927 MXD3Q9BW11 206 aa12.35□□□□□ -0.43
SKA2-208ENST00000583927 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
SKA2-208ENST00000583927 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
SKA2-208ENST00000583927 IL15P40933 162 aaPredicted RBP12.34□□□□□ -0.43
SKA2-208ENST00000583927 GYG1P46976 350 aa12.34□□□□□ -0.43
SKA2-208ENST00000583927 NBPF9Q3BBW0 867 aa12.34□□□□□ -0.43
SKA2-208ENST00000583927 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
SKA2-208ENST00000583927 ANGEL2Q5VTE6 544 aaKnown RBP12.34□□□□□ -0.43
SKA2-208ENST00000583927 KIAA0825Q8IV33 1275 aa12.34□□□□□ -0.43
SKA2-208ENST00000583927 LPIN2Q92539 896 aa12.34□□□□□ -0.43
SKA2-208ENST00000583927 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
SKA2-208ENST00000583927 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
SKA2-208ENST00000583927 GNAI2P04899 355 aa12.33□□□□□ -0.44
SKA2-208ENST00000583927 IFIT1P09914 478 aaKnown RBP12.33□□□□□ -0.44
SKA2-208ENST00000583927 MAP2K2P36507 400 aa12.33□□□□□ -0.44
SKA2-208ENST00000583927 FKBP1BP68106 108 aa12.33□□□□□ -0.44
SKA2-208ENST00000583927 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
SKA2-208ENST00000583927 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
SKA2-208ENST00000583927 SUGT1Q9Y2Z0 365 aa12.33□□□□□ -0.44
SKA2-208ENST00000583927 ASTN2O75129 1339 aaPredicted RBP12.33□□□□□ -0.44
SKA2-208ENST00000583927 MYH2Q9UKX2 1941 aa12.33□□□□□ -0.44
SKA2-208ENST00000583927 ADM5C9JUS6 153 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 HSPA1AP0DMV8 641 aaKnown RBP12.32□□□□□ -0.44
SKA2-208ENST00000583927 HSPA1BP0DMV9 641 aaKnown RBP12.32□□□□□ -0.44
SKA2-208ENST00000583927 SLC5A1P13866 664 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 HDLBPQ00341 1268 aaKnown RBP12.32□□□□□ -0.44
SKA2-208ENST00000583927 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
SKA2-208ENST00000583927 MFSD14BQ5SR56 506 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 TMEM57Q8N5G2 664 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 C2orf69Q8N8R5 385 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 CDCA5Q96FF9 252 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 CAPNS2Q96L46 248 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 GBA2Q9HCG7 927 aaPredicted RBP12.32□□□□□ -0.44
SKA2-208ENST00000583927 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
SKA2-208ENST00000583927 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
SKA2-208ENST00000583927 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
SKA2-208ENST00000583927 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
SKA2-208ENST00000583927 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
SKA2-208ENST00000583927 DZIP1LQ8IYY4 767 aaKnown RBP12.31□□□□□ -0.44
SKA2-208ENST00000583927 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
SKA2-208ENST00000583927 TNNQ9UQP3 1299 aa12.31□□□□□ -0.44
SKA2-208ENST00000583927 MS4A1P11836 297 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 BCAMP50895 628 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 HUNKP57058 714 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 CFAP100Q494V2 611 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 CYP4F22Q6NT55 531 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
SKA2-208ENST00000583927 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 PPP2R3BQ9Y5P8 575 aa12.3□□□□□ -0.44
SKA2-208ENST00000583927 SEMA3EO15041 775 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
SKA2-208ENST00000583927 MYO1BO43795 1136 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 NOGQ13253 232 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 RGMBQ6NW40 437 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 DLK2Q6UY11 383 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 SIL1Q9H173 461 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 TTF2Q9UNY4 1162 aaKnown RBP12.29□□□□□ -0.44
SKA2-208ENST00000583927 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
SKA2-208ENST00000583927 MAST3O60307 1309 aa12.29□□□□□ -0.44
SKA2-208ENST00000583927 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
SKA2-208ENST00000583927 UNCXA6NJT0 531 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 FRAT2O75474 233 aaPredicted RBP12.28□□□□□ -0.44
SKA2-208ENST00000583927 RLBP1P12271 317 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 POLA2Q14181 598 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 WDR66Q8TBY9 1149 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
SKA2-208ENST00000583927 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
SKA2-208ENST00000583927 OTOFQ9HC10 1997 aa12.27□□□□□ -0.44
SKA2-208ENST00000583927 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
SKA2-208ENST00000583927 F8W031 263 aaPredicted RBP12.27□□□□□ -0.45
SKA2-208ENST00000583927 CA12O43570 354 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 NF2P35240 595 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
SKA2-208ENST00000583927 ATP8B2P98198 1209 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 AIDAQ96BJ3 306 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.45
SKA2-208ENST00000583927 SALL1Q9NSC2 1324 aa12.27□□□□□ -0.45
SKA2-208ENST00000583927 MYO5AQ9Y4I1 1855 aaKnown RBP12.26□□□□□ -0.45
SKA2-208ENST00000583927 FOXN1O15353 648 aa12.26□□□□□ -0.45
SKA2-208ENST00000583927 SLC10A3P09131 477 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 410.5 ms