RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FKTNO75072 461 aa13.46□□□□□ -0.25
RFFL-209ENST00000581265 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.25
RFFL-209ENST00000581265 LDLRAD1Q5T700 205 aa13.46□□□□□ -0.25
RFFL-209ENST00000581265 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
RFFL-209ENST00000581265 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
RFFL-209ENST00000581265 CERS5Q8N5B7 392 aa13.46□□□□□ -0.25
RFFL-209ENST00000581265 FKBP1AP62942 108 aaKnown RBP13.45□□□□□ -0.26
RFFL-209ENST00000581265 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
RFFL-209ENST00000581265 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
RFFL-209ENST00000581265 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
RFFL-209ENST00000581265 NOM1Q5C9Z4 860 aaKnown RBP13.45□□□□□ -0.26
RFFL-209ENST00000581265 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
RFFL-209ENST00000581265 ZNF804AQ7Z570 1209 aa13.45□□□□□ -0.26
RFFL-209ENST00000581265 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
RFFL-209ENST00000581265 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
RFFL-209ENST00000581265 DLL1O00548 723 aa13.44□□□□□ -0.26
RFFL-209ENST00000581265 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
RFFL-209ENST00000581265 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
RFFL-209ENST00000581265 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
RFFL-209ENST00000581265 C9orf78Q9NZ63 289 aaPredicted RBP13.44□□□□□ -0.26
RFFL-209ENST00000581265 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
RFFL-209ENST00000581265 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
RFFL-209ENST00000581265 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
RFFL-209ENST00000581265 ZNF594Q96JF6 807 aaPredicted RBP13.43□□□□□ -0.26
RFFL-209ENST00000581265 PRMT6Q96LA8 375 aaPredicted RBP13.43□□□□□ -0.26
RFFL-209ENST00000581265 CFHR5Q9BXR6 569 aa13.43□□□□□ -0.26
RFFL-209ENST00000581265 CNNM1Q9NRU3 951 aa13.43□□□□□ -0.26
RFFL-209ENST00000581265 ANGEL1Q9UNK9 670 aaKnown RBP13.43□□□□□ -0.26
RFFL-209ENST00000581265 PPP2R3BQ9Y5P8 575 aa13.43□□□□□ -0.26
RFFL-209ENST00000581265 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 INHBEP58166 350 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 PRKG1Q13976 671 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 CFAP100Q494V2 611 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
RFFL-209ENST00000581265 COL1A1P02452 1464 aaPredicted RBP13.42□□□□□ -0.26
RFFL-209ENST00000581265 FAM205AQ6ZU69 1335 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
RFFL-209ENST00000581265 MYO1BO43795 1136 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
RFFL-209ENST00000581265 PLIN1O60240 522 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
RFFL-209ENST00000581265 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
RFFL-209ENST00000581265 SLC10A4Q96EP9 437 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 KAZALD1Q96I82 304 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 COLQQ9Y215 455 aaPredicted RBP13.41□□□□□ -0.26
RFFL-209ENST00000581265 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
RFFL-209ENST00000581265 UTYO14607 1347 aa13.4□□□□□ -0.26
RFFL-209ENST00000581265 ALDH1A1P00352 501 aa13.4□□□□□ -0.26
RFFL-209ENST00000581265 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
RFFL-209ENST00000581265 FAM84BQ96KN1 310 aaPredicted RBP13.4□□□□□ -0.26
RFFL-209ENST00000581265 FZD1Q9UP38 647 aa13.4□□□□□ -0.26
RFFL-209ENST00000581265 RIPOR2Q9Y4F9 1068 aa13.4□□□□□ -0.26
RFFL-209ENST00000581265 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
RFFL-209ENST00000581265 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
RFFL-209ENST00000581265 NBPF7P0C2Y1 421 aaPredicted RBP13.39□□□□□ -0.27
RFFL-209ENST00000581265 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
RFFL-209ENST00000581265 HIBADHP31937 336 aaKnown RBP13.39□□□□□ -0.27
RFFL-209ENST00000581265 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
RFFL-209ENST00000581265 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
RFFL-209ENST00000581265 PUS3Q9BZE2 481 aaKnown RBP13.39□□□□□ -0.27
RFFL-209ENST00000581265 R3HDMLQ9H3Y0 253 aa13.39□□□□□ -0.27
RFFL-209ENST00000581265 JAG2Q9Y219 1238 aa13.39□□□□□ -0.27
RFFL-209ENST00000581265 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
RFFL-209ENST00000581265 USP2O75604 605 aaPredicted RBP13.38□□□□□ -0.27
RFFL-209ENST00000581265 GYG1P46976 350 aa13.38□□□□□ -0.27
RFFL-209ENST00000581265 RBM5P52756 815 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFFL-209ENST00000581265 RASA3Q14644 834 aa13.38□□□□□ -0.27
RFFL-209ENST00000581265 RABL6Q3YEC7 729 aaPredicted RBP13.38□□□□□ -0.27
RFFL-209ENST00000581265 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
RFFL-209ENST00000581265 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
RFFL-209ENST00000581265 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
RFFL-209ENST00000581265 AOX1Q06278 1338 aa13.38□□□□□ -0.27
RFFL-209ENST00000581265 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
RFFL-209ENST00000581265 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
RFFL-209ENST00000581265 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
RFFL-209ENST00000581265 VEZTQ9HBM0 779 aa13.37□□□□□ -0.27
RFFL-209ENST00000581265 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
RFFL-209ENST00000581265 TTF2Q9UNY4 1162 aaKnown RBP13.37□□□□□ -0.27
RFFL-209ENST00000581265 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
RFFL-209ENST00000581265 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
RFFL-209ENST00000581265 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
RFFL-209ENST00000581265 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
RFFL-209ENST00000581265 TNFAIP1Q13829 316 aa13.36□□□□□ -0.27
RFFL-209ENST00000581265 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
RFFL-209ENST00000581265 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
RFFL-209ENST00000581265 MRPL50Q8N5N7 158 aaKnown RBP13.36□□□□□ -0.27
RFFL-209ENST00000581265 WNK4Q96J92 1243 aa13.36□□□□□ -0.27
RFFL-209ENST00000581265 BICC1Q9H694 974 aaKnown RBP13.36□□□□□ -0.27
RFFL-209ENST00000581265 ZNF70Q9UC06 446 aaPredicted RBP13.36□□□□□ -0.27
RFFL-209ENST00000581265 A0A1B0GUL6 1792 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms