RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 CCDC158Q5M9N0 1113 aa18.52■□□□□ 0.56
MKS1-210ENST00000581180 B4GALNT3Q6L9W6 998 aa18.52■□□□□ 0.56
MKS1-210ENST00000581180 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
MKS1-210ENST00000581180 C16orf71Q8IYS4 520 aaPredicted RBP18.52■□□□□ 0.56
MKS1-210ENST00000581180 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
MKS1-210ENST00000581180 RASGRF1Q13972 1273 aa18.51■□□□□ 0.55
MKS1-210ENST00000581180 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
MKS1-210ENST00000581180 DENND2AQ9ULE3 1009 aa18.51■□□□□ 0.55
MKS1-210ENST00000581180 PDS5AQ29RF7 1337 aaKnown RBP18.5■□□□□ 0.55
MKS1-210ENST00000581180 SALL3Q9BXA9 1300 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 MCAMP43121 646 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 FKBP1AP62942 108 aaKnown RBP18.5■□□□□ 0.55
MKS1-210ENST00000581180 SCARF1Q14162 830 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 TTC39AQ5SRH9 613 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 RSBN1LQ6PCB5 846 aaPredicted RBP18.5■□□□□ 0.55
MKS1-210ENST00000581180 CHD1LQ86WJ1 897 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 OTUD7AQ8TE49 926 aaPredicted RBP18.5■□□□□ 0.55
MKS1-210ENST00000581180 L3MBTL3Q96JM7 780 aaPredicted RBP18.5■□□□□ 0.55
MKS1-210ENST00000581180 GMLQ99445 158 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 MXD3Q9BW11 206 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 JAG2Q9Y219 1238 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 GJA3Q9Y6H8 435 aa18.5■□□□□ 0.55
MKS1-210ENST00000581180 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
MKS1-210ENST00000581180 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
MKS1-210ENST00000581180 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
MKS1-210ENST00000581180 CERS5Q8N5B7 392 aa18.49■□□□□ 0.55
MKS1-210ENST00000581180 AGBL3Q8NEM8 1001 aa18.49■□□□□ 0.55
MKS1-210ENST00000581180 FBXW7Q969H0 707 aa18.49■□□□□ 0.55
MKS1-210ENST00000581180 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
MKS1-210ENST00000581180 LNPKQ9C0E8 428 aa18.49■□□□□ 0.55
MKS1-210ENST00000581180 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
MKS1-210ENST00000581180 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
MKS1-210ENST00000581180 SCNN1DP51172 638 aa18.48■□□□□ 0.55
MKS1-210ENST00000581180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.48■□□□□ 0.55
MKS1-210ENST00000581180 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
MKS1-210ENST00000581180 DOCK2Q92608 1830 aa18.48■□□□□ 0.55
MKS1-210ENST00000581180 MYO3BQ8WXR4 1341 aa18.48■□□□□ 0.55
MKS1-210ENST00000581180 SALL1Q9NSC2 1324 aa18.48■□□□□ 0.55
MKS1-210ENST00000581180 POTECB2RU33 542 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 RPS12P25398 132 aaKnown RBP18.47■□□□□ 0.55
MKS1-210ENST00000581180 YY1P25490 414 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
MKS1-210ENST00000581180 MFSD14BQ5SR56 506 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 WDR66Q8TBY9 1149 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 TBC1D22AQ8WUA7 517 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 DPF2Q92785 391 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
MKS1-210ENST00000581180 ATP5JP18859 108 aa18.46■□□□□ 0.55
MKS1-210ENST00000581180 GRIK5Q16478 980 aa18.46■□□□□ 0.55
MKS1-210ENST00000581180 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
MKS1-210ENST00000581180 MYH7P12883 1935 aa18.46■□□□□ 0.55
MKS1-210ENST00000581180 POLR2AP24928 1970 aaKnown RBP18.45■□□□□ 0.54
MKS1-210ENST00000581180 MX1P20591 662 aa18.45■□□□□ 0.54
MKS1-210ENST00000581180 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
MKS1-210ENST00000581180 GPRC5DQ9NZD1 345 aa18.45■□□□□ 0.54
MKS1-210ENST00000581180 STAP2Q9UGK3 403 aa18.45■□□□□ 0.54
MKS1-210ENST00000581180 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
MKS1-210ENST00000581180 SHTN1A0MZ66 631 aa18.44■□□□□ 0.54
MKS1-210ENST00000581180 PDE4AP27815 886 aa18.44■□□□□ 0.54
MKS1-210ENST00000581180 ZAP70P43403 619 aa18.44■□□□□ 0.54
MKS1-210ENST00000581180 TSHZ3Q63HK5 1081 aa18.44■□□□□ 0.54
MKS1-210ENST00000581180 PI4K2BQ8TCG2 481 aa18.44■□□□□ 0.54
MKS1-210ENST00000581180 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
MKS1-210ENST00000581180 SUGT1Q9Y2Z0 365 aa18.44■□□□□ 0.54
MKS1-210ENST00000581180 ADAMTSL1Q8N6G6 1762 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 CYP2E1P05181 493 aaPredicted RBP18.43■□□□□ 0.54
MKS1-210ENST00000581180 EPS15P42566 896 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 PDE1AP54750 535 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 PLEKHM2Q8IWE5 1019 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
MKS1-210ENST00000581180 GPATCH3Q96I76 525 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 HAUS7Q99871 368 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 NDUFB9Q9Y6M9 179 aa18.43■□□□□ 0.54
MKS1-210ENST00000581180 ECM29Q5VYK3 1845 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 USP17L8P0C7I0 530 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 PRDX5P30044 214 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 ZNF280AP59817 542 aaPredicted RBP18.42■□□□□ 0.54
MKS1-210ENST00000581180 TBC1D9Q6ZT07 1266 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 KIAA0825Q8IV33 1275 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 MICALL2Q8IY33 904 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
MKS1-210ENST00000581180 OSBPL3Q9H4L5 887 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 RRAGCQ9HB90 399 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 NMRK2Q9NPI5 230 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 MAST2Q6P0Q8 1798 aa18.42■□□□□ 0.54
MKS1-210ENST00000581180 AK9Q5TCS8 1911 aa18.41■□□□□ 0.54
MKS1-210ENST00000581180 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
MKS1-210ENST00000581180 MMP14P50281 582 aa18.41■□□□□ 0.54
MKS1-210ENST00000581180 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
MKS1-210ENST00000581180 HACL1Q9UJ83 578 aa18.41■□□□□ 0.54
MKS1-210ENST00000581180 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
MKS1-210ENST00000581180 F8W031 263 aaPredicted RBP18.4■□□□□ 0.54
MKS1-210ENST00000581180 ERC2O15083 957 aa18.4■□□□□ 0.54
MKS1-210ENST00000581180 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
MKS1-210ENST00000581180 VEGFAP15692 232 aaPredicted RBP18.4■□□□□ 0.54
MKS1-210ENST00000581180 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms