RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 BLMP54132 1417 aaPredicted RBP11.72□□□□□ -0.53
MSI2-209ENST00000579483 JAKMIP3Q5VZ66 844 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
MSI2-209ENST00000579483 ZMYM4Q5VZL5 1548 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 CCDC171Q6TFL3 1326 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 TNNI3KQ59H18 835 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 CNNM3Q8NE01 707 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 BRF1Q92994 677 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 FPGT-TNNI3KV9GXZ4 949 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 PRC1O43663 620 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 STX6O43752 255 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 NASPP49321 788 aaPredicted RBP11.71□□□□□ -0.53
MSI2-209ENST00000579483 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
MSI2-209ENST00000579483 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.54
MSI2-209ENST00000579483 FERMT3Q86UX7 667 aa11.71□□□□□ -0.54
MSI2-209ENST00000579483 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.54
MSI2-209ENST00000579483 APPBP2Q92624 585 aa11.71□□□□□ -0.54
MSI2-209ENST00000579483 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 SSFA2P28290 1259 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 SUPT20HL1Q3ZLR7 823 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 CACNA2D4Q7Z3S7 1137 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 OVOS2A0A0G2JMS6 1433 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 OVOS2A0A0J9YW53 1432 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 OVOS2Q6IE36 1432 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
MSI2-209ENST00000579483 C20orf194Q5TEA3 1177 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 TBC1D9Q6ZT07 1266 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 TTF2Q9UNY4 1162 aaKnown RBP11.7□□□□□ -0.54
MSI2-209ENST00000579483 GCC2Q8IWJ2 1684 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 XDHP47989 1333 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 ERVV-1B6SEH8 477 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 PPEF1O14829 653 aaPredicted RBP11.7□□□□□ -0.54
MSI2-209ENST00000579483 MFSD14BQ5SR56 506 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 DHX37Q8IY37 1157 aaKnown RBP11.7□□□□□ -0.54
MSI2-209ENST00000579483 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
MSI2-209ENST00000579483 ALG1Q9BT22 464 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 ANKRD62A6NC57 917 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 SDSP20132 328 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 GTF2IP78347 998 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 TAF4BQ92750 862 aa11.7□□□□□ -0.54
MSI2-209ENST00000579483 SEMA3EO15041 775 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
MSI2-209ENST00000579483 TMEM87BQ96K49 555 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 KRT79Q5XKE5 535 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 AOX1Q06278 1338 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
MSI2-209ENST00000579483 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 CHURC1Q8WUH1 139 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 IBTKQ9P2D0 1353 aaPredicted RBP11.69□□□□□ -0.54
MSI2-209ENST00000579483 BACH1O14867 736 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 CA8P35219 290 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 UBE4AQ14139 1066 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 IMPG2Q9BZV3 1241 aa11.69□□□□□ -0.54
MSI2-209ENST00000579483 TNS3Q68CZ2 1445 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 FERMT1Q9BQL6 677 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 DDX19AQ9NUU7 478 aaKnown RBP11.68□□□□□ -0.54
MSI2-209ENST00000579483 JAG2Q9Y219 1238 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 KDM5AP29375 1690 aaKnown RBP11.68□□□□□ -0.54
MSI2-209ENST00000579483 TET3O43151 1660 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 NEURL1BA8MQ27 555 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 NPR1P16066 1061 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 SSR1P43307 286 aaKnown RBP11.68□□□□□ -0.54
MSI2-209ENST00000579483 HSP90B2PQ58FF3 399 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 TTLL6Q8N841 843 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 USP19O94966 1318 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 KIF1BO60333 1816 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 SPATA31E1Q6ZUB1 1445 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 KRT13P13646 458 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 MCTP2Q6DN12 878 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 TCHPQ9BT92 498 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 EPB41L2O43491 1005 aaKnown RBP11.68□□□□□ -0.54
MSI2-209ENST00000579483 SPA17Q15506 151 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
MSI2-209ENST00000579483 EXOC1Q9NV70 894 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
MSI2-209ENST00000579483 KDRP35968 1356 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 TIMM10P62072 90 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms