RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CNNM1Q9NRU3 951 aa11.33□□□□□ -0.6
GGA3-207ENST00000578896 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
GGA3-207ENST00000578896 CLRN2A0PK11 232 aa11.32□□□□□ -0.6
GGA3-207ENST00000578896 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
GGA3-207ENST00000578896 FKBP1BP68106 108 aa11.32□□□□□ -0.6
GGA3-207ENST00000578896 DLGAP5Q15398 846 aa11.32□□□□□ -0.6
GGA3-207ENST00000578896 CFAP100Q494V2 611 aa11.32□□□□□ -0.6
GGA3-207ENST00000578896 SRCIN1Q9C0H9 1055 aa11.32□□□□□ -0.6
GGA3-207ENST00000578896 IL1R1P14778 569 aa11.31□□□□□ -0.6
GGA3-207ENST00000578896 GYG1P46976 350 aa11.31□□□□□ -0.6
GGA3-207ENST00000578896 C15orf52Q6ZUT6 534 aaKnown RBP11.31□□□□□ -0.6
GGA3-207ENST00000578896 ZNF804AQ7Z570 1209 aa11.31□□□□□ -0.6
GGA3-207ENST00000578896 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
GGA3-207ENST00000578896 PRMT6Q96LA8 375 aaPredicted RBP11.31□□□□□ -0.6
GGA3-207ENST00000578896 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
GGA3-207ENST00000578896 SAGE1Q9NXZ1 904 aa11.31□□□□□ -0.6
GGA3-207ENST00000578896 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
GGA3-207ENST00000578896 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
GGA3-207ENST00000578896 NF2P35240 595 aa11.3□□□□□ -0.6
GGA3-207ENST00000578896 RBM5P52756 815 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGA3-207ENST00000578896 SOX10P56693 466 aa11.3□□□□□ -0.6
GGA3-207ENST00000578896 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
GGA3-207ENST00000578896 APOBEC3FQ8IUX4 373 aaKnown RBP11.3□□□□□ -0.6
GGA3-207ENST00000578896 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
GGA3-207ENST00000578896 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
GGA3-207ENST00000578896 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
GGA3-207ENST00000578896 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
GGA3-207ENST00000578896 GRIK5Q16478 980 aa11.29□□□□□ -0.6
GGA3-207ENST00000578896 LRRC24Q50LG9 513 aa11.29□□□□□ -0.6
GGA3-207ENST00000578896 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
GGA3-207ENST00000578896 ARMC9Q7Z3E5 817 aa11.29□□□□□ -0.6
GGA3-207ENST00000578896 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
GGA3-207ENST00000578896 CLMNQ96JQ2 1002 aa11.29□□□□□ -0.6
GGA3-207ENST00000578896 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
GGA3-207ENST00000578896 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
GGA3-207ENST00000578896 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
GGA3-207ENST00000578896 RGS19P49795 217 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
GGA3-207ENST00000578896 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
GGA3-207ENST00000578896 TM4SF4P48230 202 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 UBE4AQ14139 1066 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 MFSD14BQ5SR56 506 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 CTU1Q7Z7A3 348 aaKnown RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 TDRD7Q8NHU6 1098 aaKnown RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 TDRD3Q9H7E2 651 aaKnown RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
GGA3-207ENST00000578896 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.61
GGA3-207ENST00000578896 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
GGA3-207ENST00000578896 MMP14P50281 582 aa11.26□□□□□ -0.61
GGA3-207ENST00000578896 RASA3Q14644 834 aa11.26□□□□□ -0.61
GGA3-207ENST00000578896 METTL24Q5JXM2 366 aa11.26□□□□□ -0.61
GGA3-207ENST00000578896 ZNF70Q9UC06 446 aaPredicted RBP11.26□□□□□ -0.61
GGA3-207ENST00000578896 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
GGA3-207ENST00000578896 KIAA0100Q14667 2235 aaKnown RBP11.25□□□□□ -0.61
GGA3-207ENST00000578896 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 GPR25O00155 361 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 MYO1BO43795 1136 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 GJA5P36382 358 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 BCAMP50895 628 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 FKBP1AP62942 108 aaKnown RBP11.25□□□□□ -0.61
GGA3-207ENST00000578896 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 RABL6Q3YEC7 729 aaPredicted RBP11.25□□□□□ -0.61
GGA3-207ENST00000578896 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 USP44Q9H0E7 712 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 HPS5Q9UPZ3 1129 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 UTYO14607 1347 aa11.25□□□□□ -0.61
GGA3-207ENST00000578896 E9PSI1 815 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
GGA3-207ENST00000578896 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
GGA3-207ENST00000578896 CRKP46108 304 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 CACNB3P54284 484 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 VPS37DQ86XT2 251 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
GGA3-207ENST00000578896 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
GGA3-207ENST00000578896 FRAT2O75474 233 aaPredicted RBP11.23□□□□□ -0.61
GGA3-207ENST00000578896 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 VGLL2Q8N8G2 317 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 CNKSR2Q8WXI2 1034 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 TMEM39BQ9GZU3 492 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 ELP3Q9H9T3 547 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
GGA3-207ENST00000578896 CENPFP49454 3210 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms